SREBF1 15130

Name: SREBF1	Sequence: fasta or formatted (1147aa)		NCBI GI: 22547195
Description: sterol regulatory element binding transcription factor 1 isoform b		Referenced in: Myc and Related Functions WD Repeat Proteins
Other entries for this name: alt prot [1177aa] sterol regulatory element binding transcription factor 1 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.2 129 3 C cysteine 1.6 18 1 D aspartate 4.4 50 1 E glutamate 3.8 44 2 F phenylalanine 2.6 30 2 G glycine 7.4 85 3 H histidine 2.4 27 1 I isoleucine 1.7 20 2 K lysine 3.0 34 1 L leucine 14.2 163 3 M methionine 1.3 15 1 N asparagine 1.7 20 2 P proline 9.6 110 3 Q glutamine 4.9 56 3 R arginine 5.8 66 3 S serine 10.2 117 3 T threonine 5.8 67 3 V valine 5.8 66 2 W tryptophan 1.3 15 2 Y tyrosine 1.3 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sterol regulatory element binding transcription fact... SREBF1 0.993 sterol regulatory element binding transcription fact... SREBF2 0.366 sterol regulatory element-binding transcription fact... FLJ22184 0.023 PREDICTED: hypothetical protein LOC80164 FLJ22184 0.022 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.019 PREDICTED: hypothetical protein FLJ22184 LOC100134663 0.019 PREDICTED: hypothetical protein, partial MUC2 0.019 mucin 2 precursor YLPM1 0.019 YLP motif containing 1 BAT2D1 0.018 HBxAg transactivated protein 2 MLXIPL 0.018 Williams Beuren syndrome chromosome region 14 isofor... MUC7 0.018 mucin 7, secreted precursor MUC7 0.018 mucin 7, secreted precursor MUC7 0.018 mucin 7, secreted precursor DIAPH1 0.017 diaphanous 1 isoform 2 DIAPH1 0.017 diaphanous 1 isoform 1 MLXIPL 0.017 Williams Beuren syndrome chromosome region 14 isofor... FMN2 0.017 formin 2 WASF2 0.017 WAS protein family, member 2 LOC100294420 0.016 PREDICTED: similar to mucin 2 SRCAP 0.016 Snf2-related CBP activator protein TFE3 0.016 transcription factor E3 CPSF6 0.015 cleavage and polyadenylation specific factor 6, 68 ... NACA 0.015 nascent polypeptide-associated complex alpha subuni... SMARCA4 0.015 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.015 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.015 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.015 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.015 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.015 SWI/SNF-related matrix-associated actin-dependent r... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.