MITF 26788

Name: MITF	Sequence: fasta or formatted (495aa)		NCBI GI: 38156705
Description: microphthalmia-associated transcription factor isoform 6		Referenced in: Skin and Related Tissues Helix-Loop-Helix Transcription Factors
Other entries for this name: alt prot [413aa] microphthalmia-associated transcription factor isoform 5 alt prot [520aa] microphthalmia-associated transcription factor isoform 1 alt prot [519aa] microphthalmia-associated transcription factor isoform 3 alt prot [504aa] microphthalmia-associated transcription factor isoform 2 alt prot [419aa] microphthalmia-associated transcription factor isoform 4
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 29 2 C cysteine 1.8 9 1 D aspartate 4.2 21 2 E glutamate 7.1 35 2 F phenylalanine 1.4 7 1 G glycine 4.0 20 1 H histidine 2.8 14 2 I isoleucine 4.6 23 2 K lysine 4.8 24 2 L leucine 10.7 53 3 M methionine 4.0 20 1 N asparagine 6.3 31 3 P proline 6.9 34 3 Q glutamine 7.7 38 3 R arginine 5.7 28 4 S serine 9.5 47 4 T threonine 6.5 32 3 V valine 4.0 20 1 W tryptophan 0.4 2 1 Y tyrosine 1.6 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 microphthalmia-associated transcription factor isofo... MITF 0.981 microphthalmia-associated transcription factor isofo... MITF 0.977 microphthalmia-associated transcription factor isofo... MITF 0.976 microphthalmia-associated transcription factor isofo... MITF 0.814 microphthalmia-associated transcription factor isofo... MITF 0.808 microphthalmia-associated transcription factor isofor... TFE3 0.422 transcription factor E3 TFEB 0.344 transcription factor EB TFEC 0.269 transcription factor EC isoform a TFEC 0.249 transcription factor EC isoform b USF2 0.035 upstream stimulatory factor 2 isoform 2 USF2 0.035 upstream stimulatory factor 2 isoform 1 USF1 0.032 upstream stimulatory factor 1 isoform 1 USF1 0.032 upstream stimulatory factor 1 isoform 2 SREBF1 0.030 sterol regulatory element binding transcription fact... SREBF1 0.030 sterol regulatory element binding transcription fact... SREBF2 0.028 sterol regulatory element-binding transcription fact... KIAA2018 0.028 hypothetical protein LOC205717 ARNTL 0.021 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.021 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.021 aryl hydrocarbon receptor nuclear translocator-like ... CLOCK 0.019 clock EP400 0.019 E1A binding protein p400 MXD4 0.019 MAD4 ARNTL2 0.018 aryl hydrocarbon receptor nuclear translocator-like ... ARNT 0.018 aryl hydrocarbon receptor nuclear translocator isofo... ARNT 0.018 aryl hydrocarbon receptor nuclear translocator isofor... MYCN 0.018 v-myc myelocytomatosis viral related oncogene, neuro... RNASEN 0.018 ribonuclease III, nuclear isoform 1 MED15 0.017 mediator complex subunit 15 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.