MITF 26785

Name: MITF	Sequence: fasta or formatted (520aa)		NCBI GI: 38156699
Description: microphthalmia-associated transcription factor isoform 1		Referenced in: Skin and Related Tissues Helix-Loop-Helix Transcription Factors
Other entries for this name: alt prot [413aa] microphthalmia-associated transcription factor isoform 5 alt prot [519aa] microphthalmia-associated transcription factor isoform 3 alt prot [504aa] microphthalmia-associated transcription factor isoform 2 alt prot [495aa] microphthalmia-associated transcription factor isoform 6 alt prot [419aa] microphthalmia-associated transcription factor isoform 4
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.4 28 2 C cysteine 1.7 9 1 D aspartate 4.2 22 2 E glutamate 8.1 42 2 F phenylalanine 1.3 7 1 G glycine 4.2 22 1 H histidine 2.7 14 2 I isoleucine 4.6 24 2 K lysine 5.2 27 2 L leucine 10.4 54 3 M methionine 3.8 20 1 N asparagine 6.0 31 3 P proline 7.1 37 3 Q glutamine 7.7 40 3 R arginine 5.4 28 4 S serine 9.6 50 4 T threonine 6.3 33 3 V valine 4.2 22 1 W tryptophan 0.2 1 1 Y tyrosine 1.7 9 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 microphthalmia-associated transcription factor isofo... MITF 0.932 microphthalmia-associated transcription factor isofo... MITF 0.932 microphthalmia-associated transcription factor isofo... MITF 0.931 microphthalmia-associated transcription factor isofo... MITF 0.776 microphthalmia-associated transcription factor isofo... MITF 0.771 microphthalmia-associated transcription factor isofor... TFE3 0.418 transcription factor E3 TFEB 0.328 transcription factor EB TFEC 0.256 transcription factor EC isoform a TFEC 0.237 transcription factor EC isoform b USF2 0.034 upstream stimulatory factor 2 isoform 2 USF2 0.034 upstream stimulatory factor 2 isoform 1 USF1 0.031 upstream stimulatory factor 1 isoform 1 USF1 0.031 upstream stimulatory factor 1 isoform 2 SREBF1 0.029 sterol regulatory element binding transcription fact... SREBF1 0.029 sterol regulatory element binding transcription fact... SREBF2 0.027 sterol regulatory element-binding transcription fact... KIAA2018 0.027 hypothetical protein LOC205717 ARNTL 0.020 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.020 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.020 aryl hydrocarbon receptor nuclear translocator-like ... CLOCK 0.018 clock EP400 0.018 E1A binding protein p400 MXD4 0.018 MAD4 ARNTL2 0.017 aryl hydrocarbon receptor nuclear translocator-like ... ARNT 0.017 aryl hydrocarbon receptor nuclear translocator isofo... ARNT 0.017 aryl hydrocarbon receptor nuclear translocator isofor... MYCN 0.017 v-myc myelocytomatosis viral related oncogene, neuro... RNASEN 0.017 ribonuclease III, nuclear isoform 1 MED15 0.016 mediator complex subunit 15 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.