RNASEN 5759

Name: RNASEN	Sequence: fasta or formatted (1374aa)		NCBI GI: 155030234
Description: ribonuclease III, nuclear isoform 1		Referenced in: MicroRNAs RNases and RNA Stability WW Domain
Other entries for this name: alt prot [1337aa] ribonuclease III, nuclear isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.5 62 2 C cysteine 2.0 28 2 D aspartate 5.0 69 2 E glutamate 7.9 109 6 F phenylalanine 4.5 62 2 G glycine 4.8 66 2 H histidine 4.5 62 2 I isoleucine 3.9 53 2 K lysine 5.1 70 2 L leucine 8.9 122 2 M methionine 3.1 42 2 N asparagine 4.1 57 2 P proline 10.0 137 5 Q glutamine 4.4 60 2 R arginine 8.2 112 3 S serine 6.6 91 4 T threonine 4.3 59 2 V valine 3.8 52 2 W tryptophan 1.0 14 1 Y tyrosine 3.4 47 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ribonuclease III, nuclear isoform 1 RNASEN 0.965 ribonuclease III, nuclear isoform 2 CPSF6 0.022 cleavage and polyadenylation specific factor 6, 68 ... FIP1L1 0.021 FIP1 like 1 isoform 2 WIPF3 0.021 WAS/WASL interacting protein family, member 3 [Homo... ESX1 0.019 extraembryonic, spermatogenesis, homeobox 1-like [Ho... FMN2 0.019 formin 2 FIP1L1 0.018 FIP1 like 1 isoform 3 FIP1L1 0.018 FIP1 like 1 isoform 1 SFRS15 0.018 splicing factor, arginine/serine-rich 15 isoform 3 ... SFRS15 0.018 splicing factor, arginine/serine-rich 15 isoform 2 ... SFRS15 0.018 splicing factor, arginine/serine-rich 15 isoform 1 [... WASF2 0.018 WAS protein family, member 2 RAPH1 0.018 Ras association and pleckstrin homology domains 1 is... RBBP6 0.018 retinoblastoma-binding protein 6 isoform 2 CHERP 0.018 calcium homeostasis endoplasmic reticulum protein [... FLJ22184 0.017 PREDICTED: hypothetical protein FLJ22184 SRRM1 0.017 serine/arginine repetitive matrix 1 WASF1 0.017 Wiskott-Aldrich syndrome protein family member 1 [Ho... WASF1 0.017 Wiskott-Aldrich syndrome protein family member 1 [Ho... WASF1 0.017 Wiskott-Aldrich syndrome protein family member 1 [Ho... WASF1 0.017 Wiskott-Aldrich syndrome protein family member 1 [Hom... SF1 0.017 splicing factor 1 isoform 1 SF3B4 0.017 splicing factor 3b, subunit 4 WIPF1 0.016 WAS/WASL interacting protein family, member 1 [Homo... WIPF1 0.016 WAS/WASL interacting protein family, member 1 PRR12 0.016 proline rich 12 FMN1 0.016 formin 1 SETD1B 0.016 SET domain containing 1B DIAPH1 0.016 diaphanous 1 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.