Guide to the Human Genome
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Name: MXD4 Sequence: fasta or formatted (209aa) NCBI GI: 5453734
Description:

MAD4

Referenced in:

Myc and Related Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         14           2
 C cysteine            0.5          1           1
 D aspartate           6.7         14           2
 E glutamate          10.0         21           2
 F phenylalanine       2.4          5           1
 G glycine             7.2         15           2
 H histidine           3.8          8           1
 I isoleucine          1.9          4           1
 K lysine              5.7         12           2
 L leucine            13.4         28           2
 M methionine          1.0          2           1
 N asparagine          1.9          4           2
 P proline             3.3          7           1
 Q glutamine           4.8         10           2
 R arginine           10.0         21           2
 S serine             10.0         21           3
 T threonine           3.8          8           2
 V valine              4.8         10           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.9          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   MAD4 
MXI1                  0.412   MAX interactor 1 isoform a 
MXD1                  0.412   MAX dimerization protein 1 
MXI1                  0.389   MAX interactor 1 isoform b 
MXD3                  0.316   MAX dimerization protein 3 isoform a 
MXI1                  0.295   MAX interactor 1 isoform c 
MXD3                  0.295   MAX dimerization protein 3 isoform b 
TFEC                  0.054   transcription factor EC isoform b 
TFEC                  0.054   transcription factor EC isoform a 
MNT                   0.054   MAX binding protein 
MYC                   0.052   myc proto-oncogene protein 
TFE3                  0.049   transcription factor E3 
MITF                  0.047   microphthalmia-associated transcription factor isofo...
MITF                  0.047   microphthalmia-associated transcription factor isofo...
MITF                  0.047   microphthalmia-associated transcription factor isofo...
MITF                  0.047   microphthalmia-associated transcription factor isofo...
MITF                  0.047   microphthalmia-associated transcription factor isofo...
MITF                  0.044   microphthalmia-associated transcription factor isofor...
USF2                  0.044   upstream stimulatory factor 2 isoform 2 
USF2                  0.044   upstream stimulatory factor 2 isoform 1 
POLR3E                0.044   polymerase (RNA) III (DNA directed) polypeptide E [Ho...
MYCN                  0.039   v-myc myelocytomatosis viral related oncogene, neuro...
TFEB                  0.039   transcription factor EB 
KIAA2018              0.039   hypothetical protein LOC205717 
SREBF2                0.039   sterol regulatory element-binding transcription fact...
USF1                  0.039   upstream stimulatory factor 1 isoform 1 
USF1                  0.039   upstream stimulatory factor 1 isoform 2 
SOHLH2                0.036   spermatogenesis and oogenesis specific basic helix-...
HOOK1                 0.034   hook homolog 1 
ARNTL                 0.031   aryl hydrocarbon receptor nuclear translocator-like ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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