Guide to the Human Genome
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Name: USF2 Sequence: fasta or formatted (346aa) NCBI GI: 4507847
Description:

upstream stimulatory factor 2 isoform 1

Referenced in:

Myc and Related Functions

Other entries for this name:
alt prot [279aa] upstream stimulatory factor 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.7         44           5
 C cysteine            0.6          2           1
 D aspartate           5.8         20           1
 E glutamate           6.6         23           2
 F phenylalanine       2.6          9           1
 G glycine             9.5         33           2
 H histidine           1.4          5           1
 I isoleucine          3.5         12           2
 K lysine              2.6          9           1
 L leucine             5.2         18           2
 M methionine          2.0          7           2
 N asparagine          4.0         14           2
 P proline             5.8         20           2
 Q glutamine           9.8         34           2
 R arginine            6.4         22           4
 S serine              5.2         18           2
 T threonine           7.2         25           2
 V valine              6.9         24           2
 W tryptophan          0.3          1           1
 Y tyrosine            1.7          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   upstream stimulatory factor 2 isoform 1 
USF2                  0.611   upstream stimulatory factor 2 isoform 2 
USF1                  0.421   upstream stimulatory factor 1 isoform 1 
USF1                  0.354   upstream stimulatory factor 1 isoform 2 
MITF                  0.051   microphthalmia-associated transcription factor isofo...
MITF                  0.051   microphthalmia-associated transcription factor isofo...
MITF                  0.051   microphthalmia-associated transcription factor isofo...
MITF                  0.051   microphthalmia-associated transcription factor isofo...
MITF                  0.051   microphthalmia-associated transcription factor isofo...
MITF                  0.051   microphthalmia-associated transcription factor isofor...
TFEB                  0.051   transcription factor EB 
TFE3                  0.048   transcription factor E3 
MAX                   0.047   MAX protein isoform b 
TFEC                  0.045   transcription factor EC isoform b 
TFEC                  0.045   transcription factor EC isoform a 
MAX                   0.044   MAX protein isoform a 
SREBF2                0.042   sterol regulatory element-binding transcription fact...
KIAA2018              0.038   hypothetical protein LOC205717 
SREBF1                0.038   sterol regulatory element binding transcription fact...
SREBF1                0.038   sterol regulatory element binding transcription fact...
MAX                   0.036   MAX protein isoform e 
MAX                   0.036   MAX protein isoform c 
ARNTL2                0.033   aryl hydrocarbon receptor nuclear translocator-like ...
ARNTL                 0.033   aryl hydrocarbon receptor nuclear translocator-like ...
ARNTL                 0.033   aryl hydrocarbon receptor nuclear translocator-like ...
ARNTL                 0.033   aryl hydrocarbon receptor nuclear translocator-like ...
MLX                   0.032   transcription factor-like protein 4 isoform alpha [H...
MLX                   0.032   transcription factor-like protein 4 isoform beta [Ho...
MLX                   0.032   transcription factor-like protein 4 isoform gamma [H...
MXI1                  0.029   MAX interactor 1 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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