SP100 2661

Name: SP100	Sequence: fasta or formatted (885aa)		NCBI GI: 122939208
Description: nuclear antigen Sp100 isoform 1		Referenced in: Ets Family Nonhistone Chromosomal Proteins Nucleus and Nucleolus PHD Finger Proteins
Other entries for this name: alt prot [879aa] nuclear antigen Sp100 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.3 29 1 C cysteine 3.4 30 2 D aspartate 5.0 44 2 E glutamate 10.3 91 4 F phenylalanine 4.3 38 2 G glycine 5.0 44 4 H histidine 2.7 24 2 I isoleucine 4.5 40 2 K lysine 7.8 69 2 L leucine 6.6 58 3 M methionine 2.1 19 2 N asparagine 5.8 51 2 P proline 5.9 52 2 Q glutamine 5.2 46 2 R arginine 7.5 66 3 S serine 9.6 85 3 T threonine 4.5 40 2 V valine 4.5 40 2 W tryptophan 0.9 8 1 Y tyrosine 1.2 11 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nuclear antigen Sp100 isoform 1 SP100 0.779 nuclear antigen Sp100 isoform 2 SP140 0.301 SP140 nuclear body protein isoform 1 SP140L 0.213 SP140 nuclear body protein-like SP110 0.185 SP110 nuclear body protein isoform c SP110 0.163 SP110 nuclear body protein isoform a SP110 0.101 SP110 nuclear body protein isoform b SP140 0.051 SP140 nuclear body protein isoform 2 TRIM24 0.042 transcriptional intermediary factor 1 alpha isoform ... TRIM24 0.042 transcriptional intermediary factor 1 alpha isoform ... TRIM33 0.039 tripartite motif-containing 33 protein isoform beta ... TRIM33 0.038 tripartite motif-containing 33 protein isoform alpha... TRIM66 0.030 tripartite motif-containing 66 AIRE 0.024 autoimmune regulator isoform 1 DEAF1 0.023 deformed epidermal autoregulatory factor 1 TRIM28 0.021 tripartite motif-containing 28 protein CHD4 0.019 chromodomain helicase DNA binding protein 4 AIRE 0.017 autoimmune regulator isoform 2 ZMYND8 0.017 zinc finger, MYND-type containing 8 isoform c CHD3 0.017 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.017 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.017 chromodomain helicase DNA binding protein 3 isoform... ZMYND8 0.016 zinc finger, MYND-type containing 8 isoform a ZMYND8 0.016 zinc finger, MYND-type containing 8 isoform b CHD5 0.016 chromodomain helicase DNA binding protein 5 DSPP 0.015 dentin sialophosphoprotein preproprotein SFRS4 0.014 splicing factor, arginine/serine-rich 4 SRRM2 0.013 splicing coactivator subunit SRm300 WHSC1L1 0.012 WHSC1L1 protein isoform long IWS1 0.012 IWS1 homolog Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.