CHD4 31940

Name: CHD4	Sequence: fasta or formatted (1912aa)		NCBI GI: 51599156
Description: chromodomain helicase DNA binding protein 4		Referenced in: Nonhistone Chromosomal Proteins PHD Finger Proteins Small RNAs in RNA Processing
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 117 7 C cysteine 1.4 27 2 D aspartate 6.3 121 5 E glutamate 11.1 213 6 F phenylalanine 3.1 59 2 G glycine 6.1 117 3 H histidine 2.4 45 2 I isoleucine 3.9 75 2 K lysine 9.2 176 6 L leucine 8.2 156 4 M methionine 3.0 57 3 N asparagine 3.9 75 2 P proline 6.5 124 5 Q glutamine 3.8 73 3 R arginine 5.8 110 2 S serine 6.2 118 3 T threonine 3.9 74 2 V valine 5.2 99 3 W tryptophan 1.5 28 1 Y tyrosine 2.5 48 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chromodomain helicase DNA binding protein 4 CHD5 0.695 chromodomain helicase DNA binding protein 5 CHD3 0.671 chromodomain helicase DNA binding protein 3 isoform... CHD3 0.670 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.669 chromodomain helicase DNA binding protein 3 isoform ... CHD2 0.146 chromodomain helicase DNA binding protein 2 isoform... CHD1 0.140 chromodomain helicase DNA binding protein 1 CHD7 0.130 chromodomain helicase DNA binding protein 7 CHD9 0.128 chromodomain helicase DNA binding protein 9 CHD6 0.127 chromodomain helicase DNA binding protein 6 CHD8 0.126 chromodomain helicase DNA binding protein 8 SMARCA1 0.104 SWI/SNF-related matrix-associated actin-dependent r... SMARCA1 0.102 SWI/SNF-related matrix-associated actin-dependent re... SMARCA5 0.101 SWI/SNF-related matrix-associated actin-dependent re... CHD1L 0.099 chromodomain helicase DNA binding protein 1-like [H... SMARCA4 0.095 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.095 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.095 SWI/SNF-related matrix-associated actin-dependent r... SMARCA2 0.095 SWI/SNF-related matrix-associated actin-dependent re... SMARCA2 0.095 SWI/SNF-related matrix-associated actin-dependent re... SMARCA4 0.094 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.094 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.094 SWI/SNF-related matrix-associated actin-dependent re... SMARCA4 0.093 SWI/SNF-related matrix-associated actin-dependent r... SMARCAD1 0.064 SWI/SNF-related, matrix-associated actin-dependent ... SMARCAD1 0.064 SWI/SNF-related, matrix-associated actin-dependent ... SMARCAD1 0.063 SWI/SNF-related, matrix-associated actin-dependent ... HELLS 0.063 helicase, lymphoid-specific ERCC6 0.059 excision repair cross-complementing rodent repair def... RAD54L 0.051 RAD54-like protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.