CHD5 23720

Name: CHD5	Sequence: fasta or formatted (1954aa)		NCBI GI: 24308089
Description: chromodomain helicase DNA binding protein 5		Referenced in: Nonhistone Chromosomal Proteins PHD Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 109 7 C cysteine 1.4 28 2 D aspartate 7.1 138 4 E glutamate 9.8 192 4 F phenylalanine 3.4 67 2 G glycine 6.8 132 3 H histidine 2.4 47 2 I isoleucine 4.0 79 2 K lysine 9.4 183 6 L leucine 9.2 180 3 M methionine 2.6 50 2 N asparagine 3.9 77 2 P proline 6.3 123 3 Q glutamine 3.9 77 3 R arginine 5.6 109 3 S serine 6.2 122 3 T threonine 3.2 62 1 V valine 4.7 91 2 W tryptophan 1.5 29 1 Y tyrosine 3.0 59 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chromodomain helicase DNA binding protein 5 CHD4 0.676 chromodomain helicase DNA binding protein 4 CHD3 0.673 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.672 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.672 chromodomain helicase DNA binding protein 3 isoform... CHD2 0.136 chromodomain helicase DNA binding protein 2 isoform... CHD1 0.130 chromodomain helicase DNA binding protein 1 CHD9 0.121 chromodomain helicase DNA binding protein 9 CHD7 0.120 chromodomain helicase DNA binding protein 7 CHD8 0.118 chromodomain helicase DNA binding protein 8 CHD6 0.118 chromodomain helicase DNA binding protein 6 SMARCA1 0.103 SWI/SNF-related matrix-associated actin-dependent r... SMARCA1 0.101 SWI/SNF-related matrix-associated actin-dependent re... SMARCA5 0.100 SWI/SNF-related matrix-associated actin-dependent re... CHD1L 0.097 chromodomain helicase DNA binding protein 1-like [H... SMARCA4 0.093 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.093 SWI/SNF-related matrix-associated actin-dependent re... SMARCA4 0.092 SWI/SNF-related matrix-associated actin-dependent r... SMARCA2 0.091 SWI/SNF-related matrix-associated actin-dependent re... SMARCA2 0.091 SWI/SNF-related matrix-associated actin-dependent re... SMARCA4 0.090 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.090 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.089 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.089 SWI/SNF-related matrix-associated actin-dependent r... HELLS 0.066 helicase, lymphoid-specific SMARCAD1 0.064 SWI/SNF-related, matrix-associated actin-dependent ... SMARCAD1 0.064 SWI/SNF-related, matrix-associated actin-dependent ... SMARCAD1 0.064 SWI/SNF-related, matrix-associated actin-dependent ... ERCC6 0.059 excision repair cross-complementing rodent repair def... RAD54L 0.049 RAD54-like protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.