CHD3 6460

Name: CHD3	Sequence: fasta or formatted (2059aa)		NCBI GI: 158420731
Description: chromodomain helicase DNA binding protein 3 isoform 3		Referenced in: Nonhistone Chromosomal Proteins PHD Finger Proteins Small RNAs in RNA Processing
Other entries for this name: alt prot [1966aa] chromodomain helicase DNA binding protein 3 isoform 2 alt prot [2000aa] chromodomain helicase DNA binding protein 3 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.2 148 10 C cysteine 1.3 27 2 D aspartate 5.7 117 3 E glutamate 11.2 230 9 F phenylalanine 3.0 62 2 G glycine 7.4 153 3 H histidine 2.5 52 2 I isoleucine 3.7 77 2 K lysine 8.2 168 5 L leucine 8.2 168 3 M methionine 2.3 48 2 N asparagine 3.4 71 2 P proline 7.6 157 9 Q glutamine 3.7 76 3 R arginine 6.8 140 3 S serine 5.5 113 2 T threonine 3.7 76 2 V valine 4.4 91 2 W tryptophan 1.4 28 1 Y tyrosine 2.8 57 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chromodomain helicase DNA binding protein 3 isoform... CHD3 0.953 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.932 chromodomain helicase DNA binding protein 3 isoform ... CHD5 0.637 chromodomain helicase DNA binding protein 5 CHD4 0.620 chromodomain helicase DNA binding protein 4 CHD2 0.132 chromodomain helicase DNA binding protein 2 isoform... CHD1 0.129 chromodomain helicase DNA binding protein 1 CHD7 0.119 chromodomain helicase DNA binding protein 7 CHD8 0.116 chromodomain helicase DNA binding protein 8 CHD6 0.116 chromodomain helicase DNA binding protein 6 CHD9 0.114 chromodomain helicase DNA binding protein 9 SMARCA1 0.100 SWI/SNF-related matrix-associated actin-dependent r... SMARCA1 0.098 SWI/SNF-related matrix-associated actin-dependent re... SMARCA5 0.095 SWI/SNF-related matrix-associated actin-dependent re... CHD1L 0.092 chromodomain helicase DNA binding protein 1-like [H... SMARCA4 0.091 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.090 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.090 SWI/SNF-related matrix-associated actin-dependent r... SMARCA2 0.090 SWI/SNF-related matrix-associated actin-dependent re... SMARCA4 0.090 SWI/SNF-related matrix-associated actin-dependent r... SMARCA2 0.090 SWI/SNF-related matrix-associated actin-dependent re... SMARCA4 0.088 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.088 SWI/SNF-related matrix-associated actin-dependent re... SMARCA4 0.086 SWI/SNF-related matrix-associated actin-dependent r... HELLS 0.063 helicase, lymphoid-specific SMARCAD1 0.059 SWI/SNF-related, matrix-associated actin-dependent ... SMARCAD1 0.059 SWI/SNF-related, matrix-associated actin-dependent ... SMARCAD1 0.058 SWI/SNF-related, matrix-associated actin-dependent ... ERCC6 0.056 excision repair cross-complementing rodent repair def... C9orf102 0.046 RAD26L hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.