Guide to the Human Genome
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Name: PHF14 Sequence: fasta or formatted (948aa) NCBI GI: 55769550
Description:

PHD finger protein 14 isoform 1

Referenced in:

PHD Finger Proteins

Other entries for this name:
alt prot [888aa] PHD finger protein 14 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         59           3
 C cysteine            4.0         38           2
 D aspartate           7.6         72           2
 E glutamate          11.5        109           4
 F phenylalanine       1.7         16           2
 G glycine             5.1         48           2
 H histidine           1.5         14           1
 I isoleucine          3.4         32           2
 K lysine              9.6         91           4
 L leucine             7.2         68           4
 M methionine          2.0         19           1
 N asparagine          4.6         44           1
 P proline             4.9         46           2
 Q glutamine           4.2         40           2
 R arginine            6.1         58           2
 S serine              9.3         88           4
 T threonine           4.2         40           4
 V valine              3.9         37           2
 W tryptophan          1.1         10           1
 Y tyrosine            2.0         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PHD finger protein 14 isoform 1 
PHF14                 0.928   PHD finger protein 14 isoform 2 
MLLT10                0.062   myeloid/lymphoid or mixed-lineage leukemia transloca...
MLLT10                0.062   myeloid/lymphoid or mixed-lineage leukemia translocat...
MLLT6                 0.057   myeloid/lymphoid or mixed-lineage leukemia (trithora...
PHF17                 0.056   PHD finger protein 17 long isoform 
PHF15                 0.056   PHD finger protein 15 
PHF17                 0.055   PHD finger protein 17 short isoform 
PHF16                 0.053   PHD finger protein 16 
PHF16                 0.053   PHD finger protein 16 
BRPF1                 0.047   bromodomain and PHD finger-containing protein 1 isof...
BRPF1                 0.047   bromodomain and PHD finger-containing protein 1 isof...
BRPF3                 0.047   bromodomain and PHD finger containing, 3 
BRD1                  0.044   bromodomain containing protein 1 
KDM4A                 0.035   jumonji domain containing 2A 
KDM4C                 0.034   jumonji domain containing 2C isoform 2 
KDM4C                 0.034   jumonji domain containing 2C isoform 1 
KDM4B                 0.032   jumonji domain containing 2B 
DSPP                  0.026   dentin sialophosphoprotein preproprotein 
EIF5B                 0.024   eukaryotic translation initiation factor 5B 
CDC2L2                0.022   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.022   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.022   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.022   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.022   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.022   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.021   cell division cycle 2-like 1 (PITSLRE proteins) isof...
MYST4                 0.020   MYST histone acetyltransferase (monocytic leukemia)...
AIRE                  0.020   autoimmune regulator isoform 1 
BRD3                  0.020   bromodomain containing protein 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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