Guide to the Human Genome
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Name: ZP2 Sequence: fasta or formatted (745aa) NCBI GI: 4508045
Description:

zona pellucida glycoprotein 2 preproprotein

Referenced in:

Ovary, Uterus and Placenta

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         44           2
 C cysteine            2.8         21           1
 D aspartate           5.5         41           2
 E glutamate           4.7         35           2
 F phenylalanine       5.0         37           2
 G glycine             6.6         49           2
 H histidine           3.0         22           1
 I isoleucine          3.5         26           1
 K lysine              4.3         32           2
 L leucine             8.9         66           3
 M methionine          3.0         22           1
 N asparagine          3.9         29           2
 P proline             5.6         42           2
 Q glutamine           3.6         27           2
 R arginine            4.3         32           2
 S serine             10.1         75           2
 T threonine           7.0         52           2
 V valine              8.1         60           3
 W tryptophan          1.1          8           1
 Y tyrosine            3.4         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zona pellucida glycoprotein 2 preproprotein 
ZP4                   0.124   zona pellucida glycoprotein 4 preproprotein 
ZP1                   0.090   zona pellucida glycoprotein 1 
CUZD1                 0.045   CUB and zona pellucida-like domains 1 
TECTA                 0.034   tectorin alpha precursor 
LOC100291777          0.028   PREDICTED: similar to DMBT1 isoform 1 
LOC100291777          0.028   PREDICTED: similar to DMBT1 isoform 2 
DMBT1                 0.028   deleted in malignant brain tumors 1 isoform c precu...
DMBT1                 0.028   deleted in malignant brain tumors 1 isoform b precu...
DMBT1                 0.028   deleted in malignant brain tumors 1 isoform a precu...
OIT3                  0.027   oncoprotein-induced transcript 3 
GP2                   0.021   zymogen granule membrane glycoprotein 2 isoform 2 [...
GP2                   0.021   zymogen granule membrane glycoprotein 2 isoform 1 [...
GP2                   0.021   zymogen granule membrane glycoprotein 2 isoform 4 [...
GP2                   0.021   zymogen granule membrane glycoprotein 2 isoform 3 [...
ZP3                   0.019   zona pellucida glycoprotein 3 isoform 1 precursor [...
ZP3                   0.019   zona pellucida glycoprotein 3 isoform 2 
UMOD                  0.018   uromodulin precursor 
UMOD                  0.018   uromodulin precursor 
ZPLD1                 0.013   zona pellucida-like domain containing 1 
UMODL1                0.011   uromodulin-like 1 isoform 1 precursor 
UMODL1                0.011   uromodulin-like 1 isoform 2 precursor 
TGFBR3                0.009   transforming growth factor, beta receptor III 
IRS4                  0.005   insulin receptor substrate 4 
PNN                   0.004   pinin, desmosome associated protein 
CUGBP1                0.004   CUG triplet repeat, RNA-binding protein 1 isoform 3 ...
CUGBP1                0.004   CUG triplet repeat, RNA-binding protein 1 isoform 1 [...
HPN                   0.003   hepsin 
HPN                   0.003   hepsin 
R3HDM1                0.003   R3H domain containing 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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