CUGBP1 33338

Name: CUGBP1	Sequence: fasta or formatted (482aa)		NCBI GI: 5729794
Description: CUG triplet repeat, RNA-binding protein 1 isoform 1		Referenced in: RNA-binding Proteins
Other entries for this name: alt prot [483aa] CUG triplet repeat, RNA-binding protein 1 isoform 2 alt prot [486aa] CUG triplet repeat, RNA-binding protein 1 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.8 52 4 C cysteine 1.5 7 2 D aspartate 3.5 17 1 E glutamate 3.3 16 2 F phenylalanine 3.7 18 1 G glycine 8.3 40 2 H histidine 1.5 7 2 I isoleucine 3.5 17 1 K lysine 5.0 24 2 L leucine 10.0 48 2 M methionine 4.4 21 1 N asparagine 6.0 29 2 P proline 4.6 22 2 Q glutamine 8.7 42 3 R arginine 2.9 14 1 S serine 10.0 48 5 T threonine 5.6 27 2 V valine 4.4 21 2 W tryptophan 0.4 2 1 Y tyrosine 2.1 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CUG triplet repeat, RNA-binding protein 1 isoform 1 [... CUGBP1 0.995 CUG triplet repeat, RNA-binding protein 1 isoform 2 ... CUGBP1 0.994 CUG triplet repeat, RNA-binding protein 1 isoform 3 ... CUGBP2 0.811 CUG triplet repeat, RNA binding protein 2 isoform 3 ... CUGBP2 0.804 CUG triplet repeat, RNA binding protein 2 isoform 4... CUGBP2 0.804 CUG triplet repeat, RNA binding protein 2 isoform 1 ... CUGBP2 0.804 CUG triplet repeat, RNA binding protein 2 isoform 2... TNRC4 0.380 trinucleotide repeat containing 4 BRUNOL6 0.368 bruno-like 6, RNA binding protein BRUNOL4 0.365 bruno-like 4, RNA binding protein isoform 2 BRUNOL4 0.364 bruno-like 4, RNA binding protein isoform 1 BRUNOL4 0.360 bruno-like 4, RNA binding protein isoform 3 BRUNOL5 0.358 bruno-like 5, RNA binding protein isoform 1 BRUNOL4 0.302 bruno-like 4, RNA binding protein isoform 4 BRUNOL5 0.113 bruno-like 5, RNA binding protein isoform 2 ELAVL1 0.064 ELAV-like 1 ELAVL4 0.061 ELAV-like 4 isoform 1 ELAVL4 0.061 ELAV-like 4 isoform 5 ELAVL4 0.061 ELAV-like 4 isoform 4 ELAVL4 0.061 ELAV-like 4 isoform 3 ELAVL4 0.061 ELAV-like 4 isoform 2 ELAVL2 0.060 ELAV (embryonic lethal, abnormal vision, Drosophila... ELAVL3 0.058 ELAV-like protein 3 isoform 2 ELAVL3 0.057 ELAV-like protein 3 isoform 1 MYEF2 0.053 myelin expression factor 2 RBM4 0.051 RNA binding motif protein 4 RBM4B 0.051 RNA binding motif protein 4B RBM45 0.049 RNA binding motif protein 45 MSI1 0.048 musashi 1 TARDBP 0.048 TAR DNA binding protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.