Guide to the Human Genome
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Name: ZP3 Sequence: fasta or formatted (424aa) NCBI GI: 160358850
Description:

zona pellucida glycoprotein 3 isoform 1 precursor

Referenced in:

Nucleus and Nucleolus
Ovary, Uterus and Placenta

Other entries for this name:
alt prot [373aa] zona pellucida glycoprotein 3 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         27           2
 C cysteine            3.5         15           2
 D aspartate           5.7         24           2
 E glutamate           6.1         26           2
 F phenylalanine       4.0         17           1
 G glycine             5.2         22           2
 H histidine           4.0         17           1
 I isoleucine          3.1         13           1
 K lysine              2.1          9           1
 L leucine            10.8         46           3
 M methionine          1.9          8           1
 N asparagine          3.1         13           1
 P proline             6.6         28           1
 Q glutamine           3.5         15           1
 R arginine            5.9         25           2
 S serine              8.5         36           2
 T threonine           7.3         31           2
 V valine              9.2         39           3
 W tryptophan          1.7          7           1
 Y tyrosine            1.4          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zona pellucida glycoprotein 3 isoform 1 precursor [... 
ZP3                   0.874   zona pellucida glycoprotein 3 isoform 2 
POMZP3                0.241   POMZP3 fusion protein isoform 1 
POMZP3                0.071   POMZP3 fusion protein isoform 2 
ZP2                   0.034   zona pellucida glycoprotein 2 preproprotein 
OIT3                  0.032   oncoprotein-induced transcript 3 
CUZD1                 0.029   CUB and zona pellucida-like domains 1 
ZP4                   0.027   zona pellucida glycoprotein 4 preproprotein 
ZP1                   0.024   zona pellucida glycoprotein 1 
LOC100291777          0.022   PREDICTED: similar to DMBT1 isoform 1 
LOC100291777          0.022   PREDICTED: similar to DMBT1 isoform 2 
DMBT1                 0.022   deleted in malignant brain tumors 1 isoform c precu...
DMBT1                 0.022   deleted in malignant brain tumors 1 isoform b precu...
DMBT1                 0.022   deleted in malignant brain tumors 1 isoform a precu...
TECTA                 0.020   tectorin alpha precursor 
LOC440292             0.017   PREDICTED: similar to hCG1731366 
LOC440292             0.017   PREDICTED: similar to hCG1731366 
LOC440292             0.017   PREDICTED: similar to COMM domain containing 4 [Hom...
GP2                   0.015   zymogen granule membrane glycoprotein 2 isoform 2 [...
GP2                   0.015   zymogen granule membrane glycoprotein 2 isoform 1 [...
GP2                   0.015   zymogen granule membrane glycoprotein 2 isoform 4 [...
GP2                   0.015   zymogen granule membrane glycoprotein 2 isoform 3 [...
DYSF                  0.006   dysferlin isoform 2 
DYSF                  0.006   dysferlin isoform 8 
DYSF                  0.006   dysferlin isoform 1 
DYSF                  0.006   dysferlin isoform 3 
DYSF                  0.006   dysferlin isoform 4 
DYSF                  0.006   dysferlin isoform 5 
DYSF                  0.006   dysferlin isoform 6 
DYSF                  0.006   dysferlin isoform 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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