CUGBP1 35183

Name: CUGBP1	Sequence: fasta or formatted (486aa)		NCBI GI: 71164871
Description: CUG triplet repeat, RNA-binding protein 1 isoform 3		Referenced in: RNA-binding Proteins
Other entries for this name: alt prot [483aa] CUG triplet repeat, RNA-binding protein 1 isoform 2 alt prot [482aa] CUG triplet repeat, RNA-binding protein 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.7 52 4 C cysteine 1.4 7 2 D aspartate 3.5 17 1 E glutamate 3.3 16 2 F phenylalanine 3.7 18 1 G glycine 8.2 40 2 H histidine 1.4 7 2 I isoleucine 3.5 17 1 K lysine 4.9 24 2 L leucine 10.3 50 2 M methionine 4.3 21 1 N asparagine 6.0 29 2 P proline 4.5 22 2 Q glutamine 8.8 43 3 R arginine 2.9 14 1 S serine 9.9 48 5 T threonine 5.6 27 2 V valine 4.3 21 2 W tryptophan 0.4 2 1 Y tyrosine 2.3 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CUG triplet repeat, RNA-binding protein 1 isoform 3 ... CUGBP1 0.985 CUG triplet repeat, RNA-binding protein 1 isoform 1 [... CUGBP1 0.981 CUG triplet repeat, RNA-binding protein 1 isoform 2 ... CUGBP2 0.797 CUG triplet repeat, RNA binding protein 2 isoform 3 ... CUGBP2 0.792 CUG triplet repeat, RNA binding protein 2 isoform 4... CUGBP2 0.791 CUG triplet repeat, RNA binding protein 2 isoform 1 ... CUGBP2 0.791 CUG triplet repeat, RNA binding protein 2 isoform 2... TNRC4 0.376 trinucleotide repeat containing 4 BRUNOL6 0.363 bruno-like 6, RNA binding protein BRUNOL5 0.362 bruno-like 5, RNA binding protein isoform 1 BRUNOL4 0.357 bruno-like 4, RNA binding protein isoform 2 BRUNOL4 0.356 bruno-like 4, RNA binding protein isoform 1 BRUNOL4 0.354 bruno-like 4, RNA binding protein isoform 3 BRUNOL4 0.295 bruno-like 4, RNA binding protein isoform 4 BRUNOL5 0.117 bruno-like 5, RNA binding protein isoform 2 ELAVL1 0.063 ELAV-like 1 ELAVL4 0.060 ELAV-like 4 isoform 1 ELAVL4 0.060 ELAV-like 4 isoform 5 ELAVL4 0.060 ELAV-like 4 isoform 4 ELAVL4 0.060 ELAV-like 4 isoform 3 ELAVL4 0.060 ELAV-like 4 isoform 2 ELAVL2 0.059 ELAV (embryonic lethal, abnormal vision, Drosophila... ELAVL3 0.056 ELAV-like protein 3 isoform 2 ELAVL3 0.055 ELAV-like protein 3 isoform 1 MYEF2 0.050 myelin expression factor 2 RBM4 0.050 RNA binding motif protein 4 RBM4B 0.050 RNA binding motif protein 4B RBM45 0.048 RNA binding motif protein 45 MSI1 0.046 musashi 1 RBMS3 0.045 RNA binding motif, single stranded interacting prote... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.