| Name: PNN | Sequence: fasta or formatted (717aa) | NCBI GI: 33356174 | |
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Description: pinin, desmosome associated protein
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Referenced in:
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 4.0 29 1 C cysteine 0.3 2 1 D aspartate 4.3 31 3 E glutamate 15.1 108 4 F phenylalanine 1.3 9 1 G glycine 4.9 35 3 H histidine 1.5 11 1 I isoleucine 2.5 18 2 K lysine 8.4 60 2 L leucine 6.0 43 3 M methionine 2.0 14 1 N asparagine 2.8 20 1 P proline 4.6 33 2 Q glutamine 7.4 53 2 R arginine 10.7 77 2 S serine 14.6 105 11 T threonine 3.8 27 1 V valine 5.4 39 2 W tryptophan 0.1 1 1 Y tyrosine 0.3 2 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 pinin, desmosome associated protein SFRS18 0.056 splicing factor, arginine/serine-rich 130 SFRS18 0.056 splicing factor, arginine/serine-rich 130 LOC727832 0.055 golgi autoantigen, golgin subfamily a-like ACIN1 0.055 apoptotic chromatin condensation inducer 1 LOC440243 0.054 PREDICTED: Putative golgin subfamily A member 6-lik... TCHH 0.053 trichohyalin LOC283767 0.053 golgi autoantigen, golgin subfamily a-like LOC283685 0.051 PREDICTED: golgi autoantigen, golgin subfamily a-li... LOC283685 0.051 PREDICTED: golgi autoantigen, golgin subfamily a-li... NKTR 0.049 natural killer-tumor recognition sequence LOC643446 0.048 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.048 PREDICTED: similar to ribonucleic acid binding prot... RNPS1 0.048 RNA-binding protein S1, serine-rich domain RNPS1 0.048 RNA-binding protein S1, serine-rich domain RP1L1 0.048 retinitis pigmentosa 1-like 1 WDR87 0.047 NYD-SP11 protein SFRS4 0.047 splicing factor, arginine/serine-rich 4 LOC645202 0.047 PREDICTED: hypothetical protein LOC645202 DSPP 0.047 dentin sialophosphoprotein preproprotein LOC643446 0.047 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.047 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.047 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.047 PREDICTED: similar to ribonucleic acid binding prote... MAP4K4 0.046 mitogen-activated protein kinase kinase kinase kinas... ZRANB2 0.045 zinc finger protein 265 isoform 1 SFRS16 0.045 splicing factor, arginine/serine-rich 16 SRRM2 0.045 splicing coactivator subunit SRm300 ZC3H13 0.044 zinc finger CCCH-type containing 13 LOC400352 0.044 PREDICTED: similar to Putative golgin subfamily A m...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
