Guide to the Human Genome
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Name: GP2 Sequence: fasta or formatted (534aa) NCBI GI: 119220571
Description:

zymogen granule membrane glycoprotein 2 isoform 2

Referenced in:

Kidney
Pancreas and Insulin

Other entries for this name:
alt prot [537aa] zymogen granule membrane glycoprotein 2 isoform 1
alt prot [390aa] zymogen granule membrane glycoprotein 2 isoform 3
alt prot [387aa] zymogen granule membrane glycoprotein 2 isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         33           2
 C cysteine            5.4         29           2
 D aspartate           5.2         28           1
 E glutamate           6.0         32           3
 F phenylalanine       3.2         17           1
 G glycine             7.1         38           2
 H histidine           2.4         13           1
 I isoleucine          3.9         21           2
 K lysine              2.2         12           1
 L leucine            10.1         54           2
 M methionine          2.2         12           1
 N asparagine          5.4         29           1
 P proline             4.9         26           1
 Q glutamine           4.7         25           1
 R arginine            5.1         27           2
 S serine              8.1         43           2
 T threonine           5.2         28           1
 V valine              7.7         41           1
 W tryptophan          1.9         10           1
 Y tyrosine            3.0         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zymogen granule membrane glycoprotein 2 isoform 2 [... 
GP2                   0.995   zymogen granule membrane glycoprotein 2 isoform 1 [...
GP2                   0.640   zymogen granule membrane glycoprotein 2 isoform 4 [...
GP2                   0.640   zymogen granule membrane glycoprotein 2 isoform 3 [...
UMOD                  0.476   uromodulin precursor 
UMOD                  0.476   uromodulin precursor 
TECTA                 0.166   tectorin alpha precursor 
OIT3                  0.153   oncoprotein-induced transcript 3 
UMODL1                0.055   uromodulin-like 1 isoform 1 precursor 
UMODL1                0.055   uromodulin-like 1 isoform 2 precursor 
TECTB                 0.045   tectorin beta 
ZPLD1                 0.043   zona pellucida-like domain containing 1 
VWDE                  0.033   von Willebrand factor D and EGF domains 
ZP2                   0.029   zona pellucida glycoprotein 2 preproprotein 
CUZD1                 0.027   CUB and zona pellucida-like domains 1 
LOC100291777          0.022   PREDICTED: similar to DMBT1 isoform 1 
LOC100291777          0.022   PREDICTED: similar to DMBT1 isoform 2 
DMBT1                 0.022   deleted in malignant brain tumors 1 isoform c precu...
DMBT1                 0.022   deleted in malignant brain tumors 1 isoform b precu...
DMBT1                 0.022   deleted in malignant brain tumors 1 isoform a precu...
ZP4                   0.020   zona pellucida glycoprotein 4 preproprotein 
ZP3                   0.012   zona pellucida glycoprotein 3 isoform 1 precursor [...
TGFBR3                0.009   transforming growth factor, beta receptor III 
MEGF10                0.008   multiple EGF-like-domains 10 
KIF20A                0.007   kinesin family member 20A 
ZP3                   0.007   zona pellucida glycoprotein 3 isoform 2 
DGKB                  0.006   diacylglycerol kinase, beta isoform 2 
DGKB                  0.006   diacylglycerol kinase, beta isoform 1 
FHL2                  0.006   four and a half LIM domains 2 
FHL2                  0.006   four and a half LIM domains 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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