Guide to the Human Genome
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Name: GP2 Sequence: fasta or formatted (390aa) NCBI GI: 119220572
Description:

zymogen granule membrane glycoprotein 2 isoform 3

Referenced in:

Kidney
Pancreas and Insulin

Other entries for this name:
alt prot [537aa] zymogen granule membrane glycoprotein 2 isoform 1
alt prot [534aa] zymogen granule membrane glycoprotein 2 isoform 2
alt prot [387aa] zymogen granule membrane glycoprotein 2 isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         24           2
 C cysteine            4.4         17           1
 D aspartate           5.4         21           1
 E glutamate           6.2         24           3
 F phenylalanine       3.3         13           1
 G glycine             5.1         20           2
 H histidine           1.8          7           1
 I isoleucine          4.9         19           2
 K lysine              2.3          9           1
 L leucine            11.5         45           2
 M methionine          2.3          9           1
 N asparagine          5.4         21           1
 P proline             4.6         18           1
 Q glutamine           5.4         21           1
 R arginine            5.6         22           2
 S serine              9.0         35           2
 T threonine           4.4         17           1
 V valine              8.7         34           1
 W tryptophan          1.3          5           1
 Y tyrosine            2.3          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zymogen granule membrane glycoprotein 2 isoform 3 [... 
GP2                   0.986   zymogen granule membrane glycoprotein 2 isoform 4 [...
GP2                   0.922   zymogen granule membrane glycoprotein 2 isoform 1 [...
GP2                   0.914   zymogen granule membrane glycoprotein 2 isoform 2 [...
UMOD                  0.454   uromodulin precursor 
UMOD                  0.454   uromodulin precursor 
TECTA                 0.233   tectorin alpha precursor 
OIT3                  0.086   oncoprotein-induced transcript 3 
UMODL1                0.078   uromodulin-like 1 isoform 1 precursor 
UMODL1                0.078   uromodulin-like 1 isoform 2 precursor 
TECTB                 0.064   tectorin beta 
ZPLD1                 0.061   zona pellucida-like domain containing 1 
ZP2                   0.042   zona pellucida glycoprotein 2 preproprotein 
CUZD1                 0.038   CUB and zona pellucida-like domains 1 
LOC100291777          0.031   PREDICTED: similar to DMBT1 isoform 1 
LOC100291777          0.031   PREDICTED: similar to DMBT1 isoform 2 
DMBT1                 0.031   deleted in malignant brain tumors 1 isoform c precu...
DMBT1                 0.031   deleted in malignant brain tumors 1 isoform b precu...
DMBT1                 0.031   deleted in malignant brain tumors 1 isoform a precu...
ZP4                   0.029   zona pellucida glycoprotein 4 preproprotein 
ZP3                   0.017   zona pellucida glycoprotein 3 isoform 1 precursor [...
TGFBR3                0.013   transforming growth factor, beta receptor III 
KIF20A                0.010   kinesin family member 20A 
ZP3                   0.010   zona pellucida glycoprotein 3 isoform 2 
ATF7IP                0.009   activating transcription factor 7 interacting protei...
CCDC141               0.009   coiled-coil domain containing 141 
MYH15                 0.008   myosin, heavy polypeptide 15 
DGKB                  0.008   diacylglycerol kinase, beta isoform 2 
DGKB                  0.008   diacylglycerol kinase, beta isoform 1 
MUC12                 0.007   PREDICTED: mucin 12, cell surface associated 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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