Guide to the Human Genome
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Name: ZMYM2 Sequence: fasta or formatted (1377aa) NCBI GI: 4508011
Description:

zinc finger protein 198

Referenced in:

Zinc Finger Proteins

Other entries for this name:
alt mRNA [1377aa] zinc finger protein 198
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4         47           2
 C cysteine            4.6         63           2
 D aspartate           5.9         81           4
 E glutamate           6.4         88           2
 F phenylalanine       3.9         54           2
 G glycine             4.9         68           2
 H histidine           2.0         28           2
 I isoleucine          3.6         49           2
 K lysine              7.4        102           3
 L leucine             7.3        100           2
 M methionine          2.6         36           2
 N asparagine          5.7         79           2
 P proline             6.2         86           4
 Q glutamine           5.5         76           3
 R arginine            3.6         49           2
 S serine              9.6        132           3
 T threonine           7.3        100           2
 V valine              6.0         82           2
 W tryptophan          0.8         11           1
 Y tyrosine            3.3         46           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 198 
ZMYM2                 1.000   zinc finger protein 198 
ZMYM3                 0.324   zinc finger protein 261 
ZMYM3                 0.324   zinc finger protein 261 
ZMYM4                 0.284   zinc finger protein 262 
ZMYM5                 0.139   zinc finger protein 237 isoform 3 
ZMYM6                 0.129   zinc finger protein 258 
ZMYM5                 0.092   zinc finger protein 237 isoform 1 
QRICH1                0.070   glutamine-rich 1 
QRICH1                0.070   glutamine-rich 1 
ZMYM5                 0.065   zinc finger protein 237 isoform 2 
ZMYM1                 0.050   zinc finger, MYM domain containing 1 
KIAA1958              0.011   hypothetical protein LOC158405 
BCORL1                0.005   BCL6 co-repressor-like 1 
EPS8                  0.005   epidermal growth factor receptor pathway substrate 8...
LDB3                  0.005   LIM domain binding 3 isoform 1 
ZNF33B                0.005   zinc finger protein 33B 
DMP1                  0.005   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
DMP1                  0.005   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
DSPP                  0.005   dentin sialophosphoprotein preproprotein 
ZNF236                0.005   zinc finger protein 236 
TPRX1                 0.005   tetra-peptide repeat homeobox 
ZNF512B               0.005   zinc finger protein 512B 
CDKN1C                0.005   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.005   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.005   cyclin-dependent kinase inhibitor 1C isoform a 
AMOT                  0.005   angiomotin isoform 2 
AMOT                  0.005   angiomotin isoform 1 
ZNF12                 0.005   zinc finger protein 12 isoform b 
ZNF12                 0.005   zinc finger protein 12 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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