Guide to the Human Genome
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Name: ZNF12 Sequence: fasta or formatted (697aa) NCBI GI: 66348108
Description:

zinc finger protein 12 isoform a

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [659aa] zinc finger protein 12 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.0         14           1
 C cysteine            6.3         44           1
 D aspartate           2.6         18           2
 E glutamate           9.9         69           3
 F phenylalanine       4.3         30           2
 G glycine             6.3         44           1
 H histidine           6.2         43           2
 I isoleucine          4.2         29           2
 K lysine              8.9         62           2
 L leucine             5.9         41           2
 M methionine          1.7         12           1
 N asparagine          3.9         27           1
 P proline             3.7         26           1
 Q glutamine           5.2         36           2
 R arginine            4.6         32           2
 S serine              7.9         55           2
 T threonine           6.5         45           2
 V valine              3.7         26           1
 W tryptophan          0.6          4           1
 Y tyrosine            5.7         40           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 12 isoform a 
ZNF12                 0.935   zinc finger protein 12 isoform b 
RBAK                  0.666   RB-associated KRAB repressor 
ZNF33B                0.488   zinc finger protein 33B 
ZNF33A                0.481   zinc finger protein 33A isoform a 
ZNF33A                0.479   zinc finger protein 33A isoform b 
LOC100287429          0.463   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.463   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.463   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.463   zinc finger protein 84 
ZNF84                 0.463   zinc finger protein 84 
ZNF569                0.457   zinc finger protein 569 
ZNF334                0.446   zinc finger protein 334 isoform a 
ZNF268                0.443   zinc finger protein 268 
ZNF184                0.435   zinc finger protein 184 
ZNF585B               0.434   zinc finger protein 585B 
ZNF624                0.431   zinc finger protein 624 
ZNF484                0.426   zinc finger protein 484 isoform a 
ZNF420                0.425   zinc finger protein 420 
ZNF567                0.423   zinc finger protein 567 
ZNF658                0.421   zinc finger protein 658 
ZNF616                0.419   zinc finger protein 616 
ZNF615                0.418   zinc finger protein 615 
ZNF470                0.417   zinc finger protein 470 
ZNF41                 0.417   zinc finger protein 41 
ZNF41                 0.417   zinc finger protein 41 
ZNF135                0.416   zinc finger protein 135 
ZNF717                0.415   zinc finger protein 717 
ZNF334                0.413   zinc finger protein 334 isoform b 
ZNF568                0.412   zinc finger protein 568 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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