Guide to the Human Genome
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Name: ZMYM3 Sequence: fasta or formatted (1370aa) NCBI GI: 4827067
Description:

zinc finger protein 261

Referenced in:

Zinc Finger Proteins

Other entries for this name:
alt mRNA [1370aa] zinc finger protein 261
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         63           2
 C cysteine            4.9         67           2
 D aspartate           5.1         70           2
 E glutamate           7.3        100           4
 F phenylalanine       3.6         50           2
 G glycine             6.4         88           2
 H histidine           1.5         20           1
 I isoleucine          2.6         36           1
 K lysine              6.0         82           3
 L leucine             9.0        123           2
 M methionine          1.9         26           1
 N asparagine          3.4         46           2
 P proline             9.2        126           7
 Q glutamine           5.0         68           3
 R arginine            5.5         75           2
 S serine              8.7        119           3
 T threonine           6.1         84           2
 V valine              5.5         76           2
 W tryptophan          1.1         15           1
 Y tyrosine            2.6         36           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 261 
ZMYM3                 1.000   zinc finger protein 261 
ZMYM2                 0.323   zinc finger protein 198 
ZMYM2                 0.323   zinc finger protein 198 
ZMYM4                 0.284   zinc finger protein 262 
ZMYM6                 0.086   zinc finger protein 258 
QRICH1                0.080   glutamine-rich 1 
QRICH1                0.080   glutamine-rich 1 
ZMYM1                 0.051   zinc finger, MYM domain containing 1 
ZMYM5                 0.048   zinc finger protein 237 isoform 3 
ZMYM5                 0.023   zinc finger protein 237 isoform 1 
PRB1                  0.013   proline-rich protein BstNI subfamily 1 isoform 1 pre...
PRB2                  0.013   proline-rich protein BstNI subfamily 2 
PRB1                  0.010   proline-rich protein BstNI subfamily 1 isoform 2 pre...
GLTSCR1               0.010   glioma tumor suppressor candidate region gene 1 [Ho...
KIAA1958              0.010   hypothetical protein LOC158405 
TAF4                  0.009   TBP-associated factor 4 
COL18A1               0.009   alpha 1 type XVIII collagen isoform 3 precursor [Ho...
COL18A1               0.009   alpha 1 type XVIII collagen isoform 2 precursor [Ho...
COL18A1               0.009   alpha 1 type XVIII collagen isoform 1 precursor [Ho...
SOBP                  0.009   sine oculis binding protein homolog 
NACA                  0.009   nascent polypeptide-associated complex alpha subuni...
PRB3                  0.008   proline-rich protein BstNI subfamily 3 precursor [H...
COL2A1                0.008   collagen, type II, alpha 1 isoform 1 precursor [Hom...
COL2A1                0.008   collagen, type II, alpha 1 isoform 2 precursor [Hom...
PRB1                  0.008   proline-rich protein BstNI subfamily 1 isoform 3 pre...
COL5A1                0.008   alpha 1 type V collagen preproprotein 
ZYX                   0.008   zyxin 
ZYX                   0.008   zyxin 
PELP1                 0.008   proline, glutamic acid and leucine rich protein 1 [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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