Guide to the Human Genome
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Name: ZMYM4 Sequence: fasta or formatted (1548aa) NCBI GI: 44890068
Description:

zinc finger protein 262

Referenced in:

Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         82           3
 C cysteine            3.9         61           2
 D aspartate           5.0         77           2
 E glutamate           7.3        113           3
 F phenylalanine       3.9         61           2
 G glycine             5.0         77           3
 H histidine           1.8         28           1
 I isoleucine          4.1         64           2
 K lysine              7.8        121           3
 L leucine             8.1        126           2
 M methionine          2.5         39           1
 N asparagine          4.7         73           2
 P proline             5.7         89           4
 Q glutamine           5.6         86           3
 R arginine            3.9         61           3
 S serine             10.5        163           3
 T threonine           5.6         87           3
 V valine              5.7         89           2
 W tryptophan          0.6          9           1
 Y tyrosine            2.7         42           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 262 
ZMYM6                 0.318   zinc finger protein 258 
ZMYM2                 0.258   zinc finger protein 198 
ZMYM2                 0.258   zinc finger protein 198 
ZMYM3                 0.240   zinc finger protein 261 
ZMYM3                 0.240   zinc finger protein 261 
ZMYM1                 0.128   zinc finger, MYM domain containing 1 
QRICH1                0.074   glutamine-rich 1 
QRICH1                0.074   glutamine-rich 1 
ZMYM5                 0.044   zinc finger protein 237 isoform 3 
ZMYM5                 0.016   zinc finger protein 237 isoform 1 
KIAA1958              0.009   hypothetical protein LOC158405 
BCORL1                0.008   BCL6 co-repressor-like 1 
SOBP                  0.006   sine oculis binding protein homolog 
DOT1L                 0.006   DOT1-like, histone H3 methyltransferase 
CCDC55                0.006   coiled-coil domain containing 55 isoform 1 
ANK3                  0.005   ankyrin 3 isoform 1 
SRCAP                 0.005   Snf2-related CBP activator protein 
MDN1                  0.005   MDN1, midasin homolog 
RAI2                  0.005   retinoic acid induced 2 
LDB3                  0.005   LIM domain binding 3 isoform 1 
ZNF16                 0.005   zinc finger protein 16 
ZNF16                 0.005   zinc finger protein 16 
MUC2                  0.004   mucin 2 precursor 
SON                   0.004   SON DNA-binding protein isoform F 
SON                   0.004   SON DNA-binding protein isoform B 
SPATA21               0.004   spermatogenesis associated 21 
DCAF8L2               0.004   DDB1 and CUL4 associated factor 8-like 2 
EVI1                  0.004   ecotropic viral integration site 1 isoform a 
EVI1                  0.004   ecotropic viral integration site 1 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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