Guide to the Human Genome
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Name: ZNF12 Sequence: fasta or formatted (659aa) NCBI GI: 110349775
Description:

zinc finger protein 12 isoform b

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [697aa] zinc finger protein 12 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.0         13           1
 C cysteine            6.2         41           1
 D aspartate           2.4         16           2
 E glutamate          10.2         67           3
 F phenylalanine       4.4         29           2
 G glycine             6.4         42           1
 H histidine           6.5         43           2
 I isoleucine          4.2         28           2
 K lysine              8.8         58           2
 L leucine             5.9         39           2
 M methionine          1.8         12           1
 N asparagine          3.6         24           1
 P proline             3.5         23           1
 Q glutamine           5.5         36           2
 R arginine            4.7         31           2
 S serine              7.6         50           2
 T threonine           6.4         42           2
 V valine              3.3         22           1
 W tryptophan          0.6          4           1
 Y tyrosine            5.9         39           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 12 isoform b 
ZNF12                 0.987   zinc finger protein 12 isoform a 
RBAK                  0.680   RB-associated KRAB repressor 
ZNF33B                0.491   zinc finger protein 33B 
ZNF33A                0.479   zinc finger protein 33A isoform a 
LOC100287429          0.477   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.477   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.477   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.477   zinc finger protein 84 
ZNF84                 0.477   zinc finger protein 84 
ZNF33A                0.477   zinc finger protein 33A isoform b 
ZNF569                0.471   zinc finger protein 569 
ZNF268                0.466   zinc finger protein 268 
ZNF420                0.455   zinc finger protein 420 
ZNF585B               0.449   zinc finger protein 585B 
ZNF568                0.447   zinc finger protein 568 
ZNF135                0.445   zinc finger protein 135 
ZNF184                0.444   zinc finger protein 184 
ZNF624                0.444   zinc finger protein 624 
ZNF470                0.442   zinc finger protein 470 
ZNF616                0.436   zinc finger protein 616 
ZNF717                0.435   zinc finger protein 717 
ZNF334                0.434   zinc finger protein 334 isoform a 
ZNF615                0.434   zinc finger protein 615 
ZNF546                0.433   zinc finger protein 546 
ZNF347                0.431   zinc finger protein 347 
ZNF658                0.429   zinc finger protein 658 
ZNF182                0.429   zinc finger protein 21 isoform 2 
ZNF665                0.428   zinc finger protein 665 
ZNF182                0.427   zinc finger protein 21 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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