Guide to the Human Genome
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Name: KIAA1958 Sequence: fasta or formatted (716aa) NCBI GI: 55741647
Description:

hypothetical protein LOC158405

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         43           1
 C cysteine            3.1         22           2
 D aspartate           4.7         34           2
 E glutamate           6.1         44           3
 F phenylalanine       2.5         18           1
 G glycine             5.0         36           2
 H histidine           3.2         23           1
 I isoleucine          4.2         30           2
 K lysine              5.3         38           2
 L leucine             8.0         57           2
 M methionine          2.4         17           1
 N asparagine          4.2         30           1
 P proline             6.4         46           2
 Q glutamine           4.7         34           3
 R arginine            4.6         33           2
 S serine             12.2         87           3
 T threonine           6.8         49           2
 V valine              6.3         45           2
 W tryptophan          1.1          8           1
 Y tyrosine            3.1         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC158405 
ZMYM2                 0.022   zinc finger protein 198 
ZMYM2                 0.022   zinc finger protein 198 
ZNF276                0.020   zinc finger protein 276 isoform a 
ZNF276                0.020   zinc finger protein 276 isoform b 
ZMYM3                 0.019   zinc finger protein 261 
ZMYM3                 0.019   zinc finger protein 261 
ZMYM4                 0.019   zinc finger protein 262 
KCTD1                 0.018   potassium channel tetramerisation domain containing...
QRICH1                0.017   glutamine-rich 1 
QRICH1                0.017   glutamine-rich 1 
ZNF692                0.010   zinc finger protein 692 isoform 2 
ZNF692                0.010   zinc finger protein 692 isoform 1 
SETD1B                0.010   SET domain containing 1B 
C6orf132              0.008   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.008   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.008   PREDICTED: hypothetical protein LOC647024 
MAVS                  0.008   virus-induced signaling adapter 
PHC3                  0.008   polyhomeotic like 3 
FLJ22184              0.008   PREDICTED: hypothetical protein LOC80164 
MUC16                 0.008   mucin 16 
ABI3BP                0.008   ABI gene family, member 3 (NESH) binding protein [Ho...
PCDHGB2               0.007   protocadherin gamma subfamily B, 2 isoform 1 precurs...
ZNF653                0.007   zinc finger protein 653 
PCDHGB2               0.007   protocadherin gamma subfamily B, 2 isoform 2 precurs...
PCLO                  0.006   piccolo isoform 2 
PCLO                  0.006   piccolo isoform 1 
TSC22D1               0.006   TSC22 domain family, member 1 isoform 1 
MKL2                  0.006   megakaryoblastic leukemia 2 protein 
MN1                   0.006   meningioma  1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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