Guide to the Human Genome
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Name: ZNF33B Sequence: fasta or formatted (778aa) NCBI GI: 24307875
Description:

zinc finger protein 33B

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.1         16           1
 C cysteine            6.3         49           1
 D aspartate           2.7         21           1
 E glutamate           9.5         74           3
 F phenylalanine       5.4         42           2
 G glycine             5.9         46           1
 H histidine           7.3         57           2
 I isoleucine          2.8         22           2
 K lysine             10.3         80           2
 L leucine             6.2         48           3
 M methionine          0.9          7           1
 N asparagine          5.1         40           2
 P proline             3.2         25           2
 Q glutamine           5.5         43           1
 R arginine            4.4         34           2
 S serine              7.5         58           3
 T threonine           7.1         55           1
 V valine              3.5         27           2
 W tryptophan          0.8          6           1
 Y tyrosine            3.6         28           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 33B 
ZNF33A                0.923   zinc finger protein 33A isoform a 
ZNF33A                0.919   zinc finger protein 33A isoform b 
ZNF658                0.453   zinc finger protein 658 
LOC100287429          0.453   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.453   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.453   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.453   zinc finger protein 84 
ZNF84                 0.453   zinc finger protein 84 
ZNF717                0.447   zinc finger protein 717 
LOC100287163          0.442   PREDICTED: hypothetical protein XP_002343923 
ZNF268                0.434   zinc finger protein 268 
ZNF12                 0.422   zinc finger protein 12 isoform a 
ZNF347                0.417   zinc finger protein 347 
ZNF782                0.409   zinc finger protein 782 
ZNF334                0.405   zinc finger protein 334 isoform a 
ZNF41                 0.404   zinc finger protein 41 
ZNF41                 0.404   zinc finger protein 41 
ZNF484                0.403   zinc finger protein 484 isoform a 
RBAK                  0.401   RB-associated KRAB repressor 
ZNF160                0.399   zinc finger protein 160 
ZNF160                0.399   zinc finger protein 160 
ZNF160                0.399   zinc finger protein 160 
ZNF615                0.398   zinc finger protein 615 
ZNF546                0.397   zinc finger protein 546 
ZNF585B               0.396   zinc finger protein 585B 
ZNF624                0.395   zinc finger protein 624 
ZNF12                 0.391   zinc finger protein 12 isoform b 
ZNF845                0.386   zinc finger protein 845 
ZNF841                0.381   zinc finger protein 841 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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