Guide to the Human Genome
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Name: ZNF512B Sequence: fasta or formatted (892aa) NCBI GI: 34013528
Description:

zinc finger protein 512B

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         63           2
 C cysteine            3.0         27           2
 D aspartate           3.6         32           2
 E glutamate           6.2         55           2
 F phenylalanine       1.8         16           1
 G glycine             7.8         70           2
 H histidine           2.9         26           1
 I isoleucine          2.6         23           1
 K lysine             10.3         92           3
 L leucine             5.4         48           2
 M methionine          1.9         17           1
 N asparagine          1.8         16           1
 P proline            11.8        105           3
 Q glutamine           3.0         27           1
 R arginine            7.3         65           2
 S serine              8.0         71           2
 T threonine           5.8         52           1
 V valine              7.4         66           2
 W tryptophan          0.9          8           1
 Y tyrosine            1.5         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 512B 
ZNF512                0.187   zinc finger protein 512 
VEZF1                 0.027   zinc finger protein 161 
BCORL1                0.022   BCL6 co-repressor-like 1 
MUC2                  0.021   mucin 2 precursor 
TPRX1                 0.020   tetra-peptide repeat homeobox 
PRG4                  0.019   proteoglycan 4 isoform D 
PRG4                  0.019   proteoglycan 4 isoform C 
PRG4                  0.019   proteoglycan 4 isoform B 
PRG4                  0.019   proteoglycan 4 isoform A 
COL27A1               0.019   collagen, type XXVII, alpha 1 
LOC100294420          0.019   PREDICTED: similar to mucin 2 
ZBTB40                0.018   zinc finger and BTB domain containing 40 
ZBTB40                0.018   zinc finger and BTB domain containing 40 
BAT2D1                0.018   HBxAg transactivated protein 2 
SRCAP                 0.018   Snf2-related CBP activator protein 
ZNF275                0.017   zinc finger protein 275 
MUC4                  0.017   mucin 4 isoform a 
NACA                  0.017   nascent polypeptide-associated complex alpha subuni...
COL6A3                0.016   alpha 3 type VI collagen isoform 5 precursor 
COL6A3                0.016   alpha 3 type VI collagen isoform 1 precursor 
COL6A3                0.016   alpha 3 type VI collagen isoform 4 precursor 
PCLO                  0.016   piccolo isoform 2 
PCLO                  0.016   piccolo isoform 1 
MUC17                 0.015   mucin 17 
LOC284297             0.015   hypothetical protein LOC284297 
ZNF317                0.015   zinc finger protein 317 
ZNF362                0.015   zinc finger protein 362 
ZNF143                0.015   zinc finger protein 143 
ZNF782                0.014   zinc finger protein 782 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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