Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: TYROBP Sequence: fasta or formatted (113aa) NCBI GI: 4507755
Description:

TYRO protein tyrosine kinase binding protein isoform 1 precursor

Referenced in:

Additional Immunoglobulin-related Receptors
Lectin Families
Receptor Tyrosine Kinases

Other entries for this name:
alt prot [112aa] TYRO protein tyrosine kinase binding protein isoform 2 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         10           2
 C cysteine            2.7          3           1
 D aspartate           3.5          4           1
 E glutamate           4.4          5           1
 F phenylalanine       0.9          1           1
 G glycine             8.8         10           2
 H histidine           0.0          0           0
 I isoleucine          2.7          3           1
 K lysine              1.8          2           1
 L leucine            15.9         18           4
 M methionine          1.8          2           1
 N asparagine          0.9          1           1
 P proline             6.2          7           1
 Q glutamine           7.1          8           1
 R arginine            8.0          9           1
 S serine              8.0          9           1
 T threonine           5.3          6           1
 V valine              8.8         10           1
 W tryptophan          0.0          0           0
 Y tyrosine            4.4          5           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   TYRO protein tyrosine kinase binding protein isoform ... 
TYROBP                0.965   TYRO protein tyrosine kinase binding protein isoform...
CD3D                  0.086   CD3 antigen, delta subunit isoform A precursor 
CD3G                  0.045   CD3G antigen, gamma polypeptide precursor 
PTPRH                 0.040   protein tyrosine phosphatase, receptor type, H isof...
PTPRH                 0.040   protein tyrosine phosphatase, receptor type, H isof...
HCST                  0.030   hematopoietic cell signal transducer isoform 1 precu...
HCST                  0.025   hematopoietic cell signal transducer isoform 2 precu...
KCNN1                 0.025   potassium intermediate/small conductance calcium-act...
CEACAM1               0.025   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.025   carcinoembryonic antigen-related cell adhesion molec...
LOC730109             0.010   PREDICTED: similar to hCG1811563 
LOC343052             0.010   PREDICTED: similar to hCG1996527 
LOC730109             0.010   PREDICTED: similar to hCG1811563 
LOC343052             0.010   PREDICTED: similar to hCG1996527 
LOC343052             0.010   PREDICTED: similar to hCG1996527 
VGF                   0.010   VGF nerve growth factor inducible precursor 
GREB1                 0.010   GREB1 protein isoform a 
ATG4A                 0.010   autophagy-related cysteine endopeptidase 2 isoform a...
C1orf210              0.010   hypothetical protein LOC149466 
QPRT                  0.010   quinolinate phosphoribosyltransferase 
GJD4                  0.010   connexin40.1 
CEACAM4               0.010   carcinoembryonic antigen-related cell adhesion molec...
CD7                   0.005   CD7 antigen precursor 
CEACAM3               0.005   carcinoembryonic antigen-related cell adhesion mole...
FAM117A               0.005   family with sequence similarity 117, member A 
TLE3                  0.005   transducin-like enhancer protein 3 isoform b 
LIM2                  0.005   lens intrinsic membrane protein 2, 19kDa isoform 2 ...
LIM2                  0.005   lens intrinsic membrane protein 2, 19kDa isoform 1 [...
LOC147645             0.005   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press