FAM117A 3469

Name: FAM117A	Sequence: fasta or formatted (453aa)		NCBI GI: 13540590
Description: family with sequence similarity 117, member A		Referenced in: Additional Signal Responses
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.1 41 3 C cysteine 2.9 13 2 D aspartate 3.3 15 1 E glutamate 6.6 30 3 F phenylalanine 3.8 17 1 G glycine 9.3 42 3 H histidine 2.6 12 1 I isoleucine 1.5 7 1 K lysine 4.0 18 1 L leucine 9.7 44 4 M methionine 1.1 5 1 N asparagine 2.2 10 1 P proline 13.5 61 3 Q glutamine 4.2 19 2 R arginine 7.3 33 2 S serine 11.0 50 2 T threonine 3.1 14 1 V valine 3.3 15 1 W tryptophan 1.1 5 1 Y tyrosine 0.4 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 family with sequence similarity 117, member A GLCCI1 0.254 glucocorticoid induced transcript 1 FAM117B 0.189 amyotrophic lateral sclerosis 2 (juvenile) chromosom... MLL2 0.032 myeloid/lymphoid or mixed-lineage leukemia 2 APC2 0.025 adenomatosis polyposis coli 2 LDB3 0.022 LIM domain binding 3 isoform 1 C6orf132 0.022 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.022 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.022 PREDICTED: hypothetical protein LOC647024 SH3BP1 0.021 SH3-domain binding protein 1 NOTCH3 0.020 Notch homolog 3 NACA 0.019 nascent polypeptide-associated complex alpha subuni... FLJ22184 0.017 PREDICTED: hypothetical protein FLJ22184 WNK2 0.017 WNK lysine deficient protein kinase 2 EIF4G1 0.016 eukaryotic translation initiation factor 4 gamma, 1 ... EIF4G1 0.016 eukaryotic translation initiation factor 4 gamma, 1 ... EIF4G1 0.016 eukaryotic translation initiation factor 4 gamma, 1 ... EIF4G1 0.016 eukaryotic translation initiation factor 4 gamma, 1 ... EIF4G1 0.016 eukaryotic translation initiation factor 4 gamma, 1 ... BAT2 0.016 HLA-B associated transcript-2 LOC642515 0.016 PREDICTED: similar to NG5 protein LOC642515 0.016 PREDICTED: similar to NG5 protein NCOR2 0.016 nuclear receptor co-repressor 2 isoform 2 NCOR2 0.016 nuclear receptor co-repressor 2 isoform 1 TSHZ2 0.015 teashirt zinc finger homeobox 2 ARL6IP4 0.015 SRp25 nuclear protein isoform 3 WIPF1 0.015 WAS/WASL interacting protein family, member 1 [Homo... WIPF1 0.015 WAS/WASL interacting protein family, member 1 PCLO 0.015 piccolo isoform 2 PCLO 0.015 piccolo isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.