Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CD3G Sequence: fasta or formatted (182aa) NCBI GI: 4557429
Description:

CD3G antigen, gamma polypeptide precursor

Referenced in:

T cells

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         12           2
 C cysteine            2.2          4           1
 D aspartate           6.6         12           2
 E glutamate           3.8          7           1
 F phenylalanine       3.3          6           1
 G glycine             8.2         15           1
 H histidine           1.1          2           1
 I isoleucine          6.0         11           2
 K lysine              8.2         15           3
 L leucine            11.5         21           2
 M methionine          2.2          4           1
 N asparagine          5.5         10           1
 P proline             2.2          4           1
 Q glutamine           8.8         16           1
 R arginine            3.8          7           2
 S serine              5.5         10           1
 T threonine           3.3          6           1
 V valine              5.5         10           1
 W tryptophan          1.1          2           1
 Y tyrosine            4.4          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CD3G antigen, gamma polypeptide precursor 
CD3D                  0.297   CD3 antigen, delta subunit isoform A precursor 
CD3D                  0.116   CD3 antigen, delta subunit isoform B precursor [Homo...
CD3E                  0.055   CD3E antigen, epsilon polypeptide precursor 
HMCN2                 0.038   PREDICTED: hemicentin 2 
HMCN2                 0.038   PREDICTED: hemicentin 2 
HMCN2                 0.038   PREDICTED: hemicentin 2 
TYROBP                0.035   TYRO protein tyrosine kinase binding protein isoform...
TYROBP                0.026   TYRO protein tyrosine kinase binding protein isoform ...
CEACAM21              0.017   carcinoembryonic antigen-related cell adhesion mole...
HMCN1                 0.015   hemicentin 1 
IGSF9B                0.015   immunoglobulin superfamily, member 9B 
TBL1XR1               0.012   transducin (beta)-like 1 X-linked receptor 1 
ZNF148                0.009   zinc finger protein 148 
ROBO3                 0.009   roundabout, axon guidance receptor, homolog 3 
CDSN                  0.006   corneodesmosin precursor 
TTN                   0.006   titin isoform N2-A 
TTN                   0.006   titin isoform novex-2 
TTN                   0.006   titin isoform novex-1 
TTN                   0.006   titin isoform N2-B 
OBSCN                 0.006   obscurin, cytoskeletal calmodulin and titin-interact...
OBSCN                 0.006   obscurin, cytoskeletal calmodulin and titin-interac...
WDR1                  0.006   WD repeat-containing protein 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press