Guide to the Human Genome
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Name: TYROBP Sequence: fasta or formatted (112aa) NCBI GI: 38158005
Description:

TYRO protein tyrosine kinase binding protein isoform 2 precursor

Referenced in:

Additional Immunoglobulin-related Receptors
Lectin Families
Receptor Tyrosine Kinases

Other entries for this name:
alt prot [113aa] TYRO protein tyrosine kinase binding protein isoform 1 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0          9           2
 C cysteine            2.7          3           1
 D aspartate           3.6          4           1
 E glutamate           4.5          5           1
 F phenylalanine       0.9          1           1
 G glycine             8.9         10           2
 H histidine           0.0          0           0
 I isoleucine          2.7          3           1
 K lysine              1.8          2           1
 L leucine            16.1         18           4
 M methionine          1.8          2           1
 N asparagine          0.9          1           1
 P proline             6.2          7           1
 Q glutamine           7.1          8           1
 R arginine            8.0          9           1
 S serine              8.0          9           1
 T threonine           5.4          6           1
 V valine              8.9         10           1
 W tryptophan          0.0          0           0
 Y tyrosine            4.5          5           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   TYRO protein tyrosine kinase binding protein isoform... 
TYROBP                0.974   TYRO protein tyrosine kinase binding protein isoform ...
CD3D                  0.087   CD3 antigen, delta subunit isoform A precursor 
CD3G                  0.061   CD3G antigen, gamma polypeptide precursor 
PTPRH                 0.041   protein tyrosine phosphatase, receptor type, H isof...
PTPRH                 0.041   protein tyrosine phosphatase, receptor type, H isof...
HCST                  0.031   hematopoietic cell signal transducer isoform 1 precu...
HCST                  0.026   hematopoietic cell signal transducer isoform 2 precu...
KCNN1                 0.026   potassium intermediate/small conductance calcium-act...
CEACAM1               0.026   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.026   carcinoembryonic antigen-related cell adhesion molec...
STAB1                 0.015   stabilin 1 precursor 
PILRA                 0.015   paired immunoglobulin-like type 2 receptor alpha iso...
LOC147645             0.010   PREDICTED: hypothetical protein 
LOC343052             0.010   PREDICTED: similar to hCG1996527 
LOC147645             0.010   PREDICTED: hypothetical protein 
LOC343052             0.010   PREDICTED: similar to hCG1996527 
LOC147645             0.010   PREDICTED: hypothetical protein 
LOC343052             0.010   PREDICTED: similar to hCG1996527 
CEACAM20              0.010   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.010   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.010   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.010   carcinoembryonic antigen-related cell adhesion mole...
CEACAM3               0.010   carcinoembryonic antigen-related cell adhesion mole...
ATG4A                 0.010   autophagy-related cysteine endopeptidase 2 isoform a...
C1orf210              0.010   hypothetical protein LOC149466 
QPRT                  0.010   quinolinate phosphoribosyltransferase 
LOC730109             0.010   PREDICTED: similar to hCG1811563 
LOC730109             0.010   PREDICTED: similar to hCG1811563 
FAM117A               0.010   family with sequence similarity 117, member A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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