Guide to the Human Genome
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Name: CD3D Sequence: fasta or formatted (171aa) NCBI GI: 4502669
Description:

CD3 antigen, delta subunit isoform A precursor

Referenced in:

T cells

Other entries for this name:
alt prot [127aa] CD3 antigen, delta subunit isoform B precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         11           2
 C cysteine            2.9          5           1
 D aspartate           7.6         13           2
 E glutamate           4.7          8           2
 F phenylalanine       2.9          5           1
 G glycine             7.6         13           2
 H histidine           2.3          4           1
 I isoleucine          5.8         10           2
 K lysine              2.9          5           1
 L leucine            12.3         21           3
 M methionine          1.2          2           1
 N asparagine          3.5          6           1
 P proline             2.9          5           1
 Q glutamine           4.1          7           1
 R arginine            6.4         11           1
 S serine              5.8         10           1
 T threonine           8.2         14           1
 V valine              8.2         14           1
 W tryptophan          1.2          2           1
 Y tyrosine            2.9          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CD3 antigen, delta subunit isoform A precursor 
CD3D                  0.661   CD3 antigen, delta subunit isoform B precursor [Homo...
CD3G                  0.317   CD3G antigen, gamma polypeptide precursor 
TYROBP                0.053   TYRO protein tyrosine kinase binding protein isoform...
TYROBP                0.053   TYRO protein tyrosine kinase binding protein isoform ...
CEACAM1               0.025   carcinoembryonic antigen-related cell adhesion molec...
CD3E                  0.022   CD3E antigen, epsilon polypeptide precursor 
CEACAM1               0.016   carcinoembryonic antigen-related cell adhesion molec...
FMNL2                 0.012   formin-like 2 
GPM6A                 0.012   glycoprotein M6A isoform 2 
GPM6A                 0.012   glycoprotein M6A isoform 1 
FLRT2                 0.012   fibronectin leucine rich transmembrane protein 2 [Hom...
GSG1L                 0.012   GSG1-like isoform 1 
HMCN1                 0.009   hemicentin 1 
CRY1                  0.009   cryptochrome 1 (photolyase-like) 
GPM6A                 0.009   glycoprotein M6A isoform 3 
SHISA4                0.009   shisa homolog 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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