LIM2 12931

Name: LIM2	Sequence: fasta or formatted (215aa)		NCBI GI: 21361300
Description: lens intrinsic membrane protein 2, 19kDa isoform 1		Referenced in: Crystallins and Other Eye Proteins
Other entries for this name: alt prot [173aa] lens intrinsic membrane protein 2, 19kDa isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.8 21 1 C cysteine 2.8 6 1 D aspartate 1.9 4 1 E glutamate 1.4 3 1 F phenylalanine 7.4 16 2 G glycine 11.2 24 3 H histidine 2.3 5 1 I isoleucine 5.6 12 2 K lysine 1.9 4 1 L leucine 9.3 20 2 M methionine 4.7 10 1 N asparagine 0.9 2 1 P proline 2.8 6 2 Q glutamine 3.3 7 1 R arginine 7.9 17 2 S serine 7.9 17 2 T threonine 5.6 12 1 V valine 4.7 10 2 W tryptophan 4.2 9 1 Y tyrosine 4.7 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 lens intrinsic membrane protein 2, 19kDa isoform 1 [... LIM2 0.743 lens intrinsic membrane protein 2, 19kDa isoform 2 ... EMP1 0.044 epithelial membrane protein 1 CLDND2 0.040 claudin domain containing 2 NKG7 0.033 natural killer cell group 7 sequence CLDN18 0.033 claudin 18 isoform 2 PMP22 0.028 peripheral myelin protein 22 PMP22 0.028 peripheral myelin protein 22 PMP22 0.028 peripheral myelin protein 22 EMP2 0.028 epithelial membrane protein 2 CACNG1 0.028 voltage-dependent calcium channel gamma-1 subunit [Ho... TMEM202 0.023 transmembrane protein 202 MS4A14 0.021 membrane-spanning 4-domains, subfamily A, member 14... MS4A14 0.021 membrane-spanning 4-domains, subfamily A, member 14... PLEKHA4 0.019 pleckstrin homology domain containing family A memb... PLEKHA4 0.019 pleckstrin homology domain containing family A memb... CLDN18 0.019 claudin 18 isoform 1 CACNG5 0.019 voltage-dependent calcium channel gamma-5 subunit is... CACNG3 0.016 voltage-dependent calcium channel gamma-3 subunit [Ho... TMEM47 0.016 transmembrane protein 47 CACNG6 0.016 voltage-dependent calcium channel gamma-6 subunit is... CACNG6 0.016 voltage-dependent calcium channel gamma-6 subunit is... CACNG6 0.016 voltage-dependent calcium channel gamma-6 subunit is... TMEM114 0.014 PREDICTED: transmembrane protein 114 TMEM114 0.014 PREDICTED: transmembrane protein 114, partial [Homo... TMEM114 0.014 PREDICTED: transmembrane protein 114 TMEM114 0.014 transmembrane protein 114 CLDN15 0.014 claudin 15 EMP3 0.012 epithelial membrane protein 3 LOC391359 0.009 PREDICTED: similar to hCG1784039 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.