Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PTPRH Sequence: fasta or formatted (937aa) NCBI GI: 241896926
Description:

protein tyrosine phosphatase, receptor type, H isoform 2 precursor

Referenced in:

Protein Tyrosine Phosphatases

Other entries for this name:
alt prot [1115aa] protein tyrosine phosphatase, receptor type, H isoform 1 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         61           2
 C cysteine            1.7         16           1
 D aspartate           3.9         37           1
 E glutamate           6.2         58           2
 F phenylalanine       2.1         20           2
 G glycine             8.3         78           3
 H histidine           2.0         19           1
 I isoleucine          2.7         25           1
 K lysine              2.6         24           3
 L leucine             8.3         78           4
 M methionine          1.5         14           1
 N asparagine          5.1         48           2
 P proline             5.7         53           2
 Q glutamine           5.3         50           2
 R arginine            5.0         47           2
 S serine              8.3         78           2
 T threonine           9.3         87           2
 V valine              8.5         80           2
 W tryptophan          3.5         33           2
 Y tyrosine            3.3         31           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein tyrosine phosphatase, receptor type, H isof... 
PTPRH                 0.950   protein tyrosine phosphatase, receptor type, H isof...
PTPRJ                 0.176   protein tyrosine phosphatase, receptor type, J isof...
PTPRO                 0.138   receptor-type protein tyrosine phosphatase O isoform...
PTPRB                 0.133   protein tyrosine phosphatase, receptor type, B isof...
PTPRB                 0.133   protein tyrosine phosphatase, receptor type, B isof...
PTPRO                 0.132   receptor-type protein tyrosine phosphatase O isoform ...
PTPRO                 0.127   receptor-type protein tyrosine phosphatase O isoform...
PTPRO                 0.127   receptor-type protein tyrosine phosphatase O isoform...
PTPRO                 0.126   receptor-type protein tyrosine phosphatase O isoform...
PTPRO                 0.126   receptor-type protein tyrosine phosphatase O isoform...
PTPRF                 0.112   protein tyrosine phosphatase, receptor type, F isof...
PTPRF                 0.112   protein tyrosine phosphatase, receptor type, F isof...
PTPRQ                 0.111   protein tyrosine phosphatase, receptor type, Q [Hom...
PTPRK                 0.111   protein tyrosine phosphatase, receptor type, K isofo...
PTPRD                 0.110   protein tyrosine phosphatase, receptor type, D isofor...
PTPRD                 0.110   protein tyrosine phosphatase, receptor type, D isofo...
PTPRD                 0.110   protein tyrosine phosphatase, receptor type, D isofo...
PTPRD                 0.110   protein tyrosine phosphatase, receptor type, D isofo...
PTPRD                 0.109   protein tyrosine phosphatase, receptor type, D isof...
PTPRT                 0.108   protein tyrosine phosphatase, receptor type, T isof...
PTPRT                 0.108   protein tyrosine phosphatase, receptor type, T isof...
PTPRS                 0.108   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.108   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.108   protein tyrosine phosphatase, receptor type, sigma ...
PTPRK                 0.107   protein tyrosine phosphatase, receptor type, K isof...
PTPRM                 0.104   protein tyrosine phosphatase, receptor type, M isof...
PTPRS                 0.103   protein tyrosine phosphatase, receptor type, sigma ...
PTPRM                 0.103   protein tyrosine phosphatase, receptor type, M isof...
PTPRA                 0.102   protein tyrosine phosphatase, receptor type, A isofo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press