RAE1 29290

Name: RAE1	Sequence: fasta or formatted (368aa)		NCBI GI: 4506399
Description: RAE1 (RNA export 1, S.pombe) homolog		Referenced in: Nucleus and Nucleolus Spindle, M phase, and Meiosis WD Repeat Proteins
Other entries for this name: alt mRNA [368aa] RAE1 (RNA export 1, S.pombe) homolog
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.6 28 2 C cysteine 3.0 11 2 D aspartate 6.2 23 2 E glutamate 3.3 12 2 F phenylalanine 5.2 19 1 G glycine 6.2 23 1 H histidine 3.3 12 1 I isoleucine 5.4 20 1 K lysine 6.5 24 2 L leucine 4.9 18 1 M methionine 2.4 9 2 N asparagine 6.0 22 1 P proline 6.2 23 2 Q glutamine 4.3 16 2 R arginine 3.5 13 2 S serine 9.0 33 2 T threonine 6.8 25 2 V valine 4.9 18 2 W tryptophan 2.4 9 1 Y tyrosine 2.7 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RAE1 (RNA export 1, S.pombe) homolog RAE1 1.000 RAE1 (RNA export 1, S.pombe) homolog BUB3 0.223 budding uninhibited by benzimidazoles 3 isoform b [H... BUB3 0.223 budding uninhibited by benzimidazoles 3 isoform a [Ho... WDR38 0.052 WD repeat domain 38 WDR5 0.050 WD repeat domain 5 WDR5 0.050 WD repeat domain 5 WDR51A 0.049 WD repeat domain 51A isoform 3 WDR51A 0.049 WD repeat domain 51A isoform 2 WDR51A 0.049 WD repeat domain 51A isoform 1 WDR17 0.044 WD repeat domain 17 isoform 2 WDR17 0.044 WD repeat domain 17 isoform 1 ATG16L1 0.042 APG16 autophagy 16-like isoform 1 ATG16L1 0.042 APG16 autophagy 16-like isoform 2 KATNB1 0.041 katanin p80 subunit B 1 WDR5B 0.041 WD repeat domain 5B SMU1 0.040 smu-1 suppressor of mec-8 and unc-52 homolog WDR51B 0.040 WD repeat domain 51B GNB2L1 0.040 guanine nucleotide binding protein (G protein), beta ... TAF5L 0.040 PCAF associated factor 65 beta isoform a COPB2 0.039 coatomer protein complex, subunit beta 2 (beta prime)... SNRNP40 0.039 WD repeat domain 57 (U5 snRNP specific) CHAF1B 0.039 chromatin assembly factor 1 subunit B TBL1XR1 0.036 transducin (beta)-like 1 X-linked receptor 1 SPAG16 0.036 sperm associated antigen 16 isoform 1 TAF5 0.035 TBP-associated factor 5 PRPF4 0.035 PRP4 pre-mRNA processing factor 4 homolog GNB2 0.033 guanine nucleotide-binding protein, beta-2 subunit [... WDR69 0.033 WD repeat domain 69 GNB1 0.032 guanine nucleotide-binding protein, beta-1 subunit [... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.