LOC100294420 20195

Name: LOC100294420	Sequence: fasta or formatted (2639aa)		NCBI GI: 239749951
Description: PREDICTED: similar to mucin 2		Referenced in: Mucins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.5 118 3 C cysteine 7.3 192 2 D aspartate 4.4 116 2 E glutamate 4.9 130 3 F phenylalanine 2.6 69 2 G glycine 6.5 171 3 H histidine 2.7 70 2 I isoleucine 3.3 86 2 K lysine 3.8 99 3 L leucine 5.6 149 2 M methionine 1.2 31 2 N asparagine 3.7 97 2 P proline 9.2 242 3 Q glutamine 3.4 89 2 R arginine 3.1 82 2 S serine 7.9 209 4 T threonine 15.4 406 8 V valine 6.7 178 3 W tryptophan 1.0 27 2 Y tyrosine 3.0 78 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to mucin 2 MUC2 0.493 mucin 2 precursor LOC100132635 0.221 PREDICTED: similar to mucin 5, partial MUC5B 0.200 mucin 5, subtype B, tracheobronchial MUC5AC 0.197 mucin 5AC MUC6 0.141 mucin 6, gastric LOC100291118 0.114 PREDICTED: hypothetical protein XP_002347351 LOC100287737 0.113 PREDICTED: hypothetical protein XP_002343203 VWF 0.097 von Willebrand factor preproprotein LOC100293983 0.091 PREDICTED: similar to mucin, partial OTOG 0.072 PREDICTED: otogelin isoform 1 OTOG 0.072 PREDICTED: otogelin isoform 2 OTOG 0.072 PREDICTED: otogelin isoform 2 OTOG 0.072 PREDICTED: otogelin isoform 1 OTOG 0.072 PREDICTED: otogelin isoform 2 OTOG 0.072 PREDICTED: otogelin isoform 1 SSPO 0.068 SCO-spondin C12orf64 0.055 PREDICTED: chromosome 12 open reading frame 64 [Hom... C12orf64 0.055 PREDICTED: chromosome 12 open reading frame 64 [Hom... C12orf64 0.055 PREDICTED: hypothetical protein LOC283310 LOC100293409 0.047 PREDICTED: similar to Mucin-19 PRG4 0.037 proteoglycan 4 isoform D PRG4 0.037 proteoglycan 4 isoform C PRG4 0.037 proteoglycan 4 isoform B PRG4 0.037 proteoglycan 4 isoform A FCGBP 0.036 Fc fragment of IgG binding protein MUC17 0.036 mucin 17 LOC100290309 0.036 PREDICTED: hypothetical protein XP_002348012 ZAN 0.033 zonadhesin isoform 3 ZAN 0.033 zonadhesin isoform 6 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.