MYPN 5408

Name: MYPN	Sequence: fasta or formatted (1320aa)		NCBI GI: 153792294
Description: myopalladin		Referenced in: Lysosomes and Related Organelles Muscle
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 80 2 C cysteine 2.0 27 1 D aspartate 4.2 56 3 E glutamate 7.6 100 2 F phenylalanine 3.3 43 2 G glycine 5.1 67 4 H histidine 2.3 31 2 I isoleucine 4.5 60 2 K lysine 5.3 70 2 L leucine 7.1 94 2 M methionine 1.5 20 1 N asparagine 4.2 56 2 P proline 9.8 129 3 Q glutamine 5.6 74 2 R arginine 5.7 75 2 S serine 11.7 155 3 T threonine 5.8 77 2 V valine 5.8 76 2 W tryptophan 0.5 7 1 Y tyrosine 1.7 23 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 myopalladin PALLD 0.210 palladin MYOT 0.085 myotilin isoform b MYOT 0.085 myotilin isoform a TTN 0.075 titin isoform novex-3 TTN 0.075 titin isoform N2-A TTN 0.075 titin isoform novex-2 TTN 0.075 titin isoform novex-1 TTN 0.075 titin isoform N2-B MYLK 0.044 myosin light chain kinase isoform 3B MYLK 0.044 myosin light chain kinase isoform 2 MYLK 0.040 myosin light chain kinase isoform 3A MYLK 0.040 myosin light chain kinase isoform 1 OBSCN 0.033 obscurin, cytoskeletal calmodulin and titin-interact... OBSCN 0.033 obscurin, cytoskeletal calmodulin and titin-interac... IGSF10 0.033 immunoglobulin superfamily, member 10 SPEG 0.033 SPEG complex locus HMCN1 0.032 hemicentin 1 HMCN2 0.031 PREDICTED: hemicentin 2 HMCN2 0.031 PREDICTED: hemicentin 2 HMCN2 0.031 PREDICTED: hemicentin 2 LOC100292387 0.030 PREDICTED: similar to hemicentin 2 DCC 0.030 deleted in colorectal carcinoma CNTN4 0.029 contactin 4 isoform a precursor ROBO1 0.028 roundabout 1 isoform d ROBO1 0.028 roundabout 1 isoform c ROBO1 0.028 roundabout 1 isoform b LOC642132 0.028 PREDICTED: similar to roundabout 1 isoform 1 LOC642132 0.028 PREDICTED: similar to roundabout 1 isoform 2 ROBO1 0.028 roundabout 1 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.