Guide to the Human Genome
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Name: PTPRS Sequence: fasta or formatted (1910aa) NCBI GI: 104487297
Description:

protein tyrosine phosphatase, receptor type, sigma isoform 2 precursor

Referenced in:

Protein Tyrosine Phosphatases

Other entries for this name:
alt prot [1948aa] protein tyrosine phosphatase, receptor type, sigma isoform 1 prec...
alt prot [1501aa] protein tyrosine phosphatase, receptor type, sigma isoform 3 prec...
alt prot [1505aa] protein tyrosine phosphatase, receptor type, sigma isoform 4 prec...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1        135           3
 C cysteine            1.2         22           1
 D aspartate           4.5         86           2
 E glutamate           6.8        130           2
 F phenylalanine       3.3         63           1
 G glycine             7.2        137           2
 H histidine           1.8         34           2
 I isoleucine          4.7         90           2
 K lysine              4.1         79           2
 L leucine             7.2        138           2
 M methionine          2.4         45           2
 N asparagine          3.5         66           2
 P proline             8.3        158           4
 Q glutamine           4.9         93           2
 R arginine            6.5        124           2
 S serine              6.3        120           2
 T threonine           6.9        131           3
 V valine              8.5        162           3
 W tryptophan          1.4         26           1
 Y tyrosine            3.7         71           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein tyrosine phosphatase, receptor type, sigma ... 
PTPRS                 0.991   protein tyrosine phosphatase, receptor type, sigma ...
PTPRD                 0.722   protein tyrosine phosphatase, receptor type, D isofo...
PTPRD                 0.721   protein tyrosine phosphatase, receptor type, D isofo...
PTPRD                 0.719   protein tyrosine phosphatase, receptor type, D isofor...
PTPRF                 0.661   protein tyrosine phosphatase, receptor type, F isof...
PTPRF                 0.659   protein tyrosine phosphatase, receptor type, F isof...
PTPRS                 0.489   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.489   protein tyrosine phosphatase, receptor type, sigma ...
PTPRD                 0.388   protein tyrosine phosphatase, receptor type, D isof...
PTPRD                 0.384   protein tyrosine phosphatase, receptor type, D isofo...
PTPRA                 0.147   protein tyrosine phosphatase, receptor type, A isofor...
PTPRA                 0.146   protein tyrosine phosphatase, receptor type, A isofo...
PTPRA                 0.146   protein tyrosine phosphatase, receptor type, A isofo...
PTPRE                 0.137   protein tyrosine phosphatase, receptor type, E isofor...
PTPRE                 0.136   protein tyrosine phosphatase, receptor type, E isofo...
PTPRK                 0.127   protein tyrosine phosphatase, receptor type, K isofo...
PTPRK                 0.125   protein tyrosine phosphatase, receptor type, K isof...
PTPRM                 0.123   protein tyrosine phosphatase, receptor type, M isof...
PTPRM                 0.123   protein tyrosine phosphatase, receptor type, M isof...
PTPRT                 0.118   protein tyrosine phosphatase, receptor type, T isof...
PTPRT                 0.116   protein tyrosine phosphatase, receptor type, T isof...
PTPRG                 0.112   protein tyrosine phosphatase, receptor type, G prec...
PTPRU                 0.112   protein tyrosine phosphatase, receptor type, U isof...
PTPRU                 0.110   protein tyrosine phosphatase, receptor type, U isof...
PTPRU                 0.109   protein tyrosine phosphatase, receptor type, U isof...
PTPRZ1                0.100   protein tyrosine phosphatase, receptor-type, zeta1 p...
PTPRC                 0.096   protein tyrosine phosphatase, receptor type, C isofo...
PTPRC                 0.096   protein tyrosine phosphatase, receptor type, C isofo...
PTPRC                 0.096   protein tyrosine phosphatase, receptor type, C isofo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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