Guide to the Human Genome
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Name: FGFR1 Sequence: fasta or formatted (731aa) NCBI GI: 13186236
Description:

fibroblast growth factor receptor 1 isoform 4 precursor

Referenced in:

Fibroblast Growth Factors

Other entries for this name:
alt prot [822aa] fibroblast growth factor receptor 1 isoform 1 precursor
alt prot [733aa] fibroblast growth factor receptor 1 isoform 3 precursor
alt prot [302aa] fibroblast growth factor receptor 1 isoform 5 precursor
alt prot [300aa] fibroblast growth factor receptor 1 isoform 6 precursor
alt prot [785aa] fibroblast growth factor receptor 1 isoform 9 precursor
alt prot [820aa] fibroblast growth factor receptor 1 isoform 2 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         44           2
 C cysteine            2.3         17           1
 D aspartate           5.9         43           7
 E glutamate           6.7         49           2
 F phenylalanine       2.2         16           1
 G glycine             5.6         41           2
 H histidine           2.9         21           2
 I isoleucine          4.1         30           3
 K lysine              6.7         49           2
 L leucine            10.0         73           2
 M methionine          3.3         24           3
 N asparagine          3.8         28           1
 P proline             7.1         52           2
 Q glutamine           2.6         19           1
 R arginine            4.5         33           2
 S serine              8.6         63           3
 T threonine           5.1         37           2
 V valine              7.1         52           2
 W tryptophan          1.8         13           1
 Y tyrosine            3.7         27           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fibroblast growth factor receptor 1 isoform 4 precur... 
FGFR1                 0.997   fibroblast growth factor receptor 1 isoform 3 precur...
FGFR1                 0.955   fibroblast growth factor receptor 1 isoform 2 precur...
FGFR1                 0.952   fibroblast growth factor receptor 1 isoform 1 precu...
FGFR1                 0.884   fibroblast growth factor receptor 1 isoform 9 precur...
FGFR2                 0.745   fibroblast growth factor receptor 2 isoform 1 precu...
FGFR2                 0.739   fibroblast growth factor receptor 2 isoform 6 precu...
FGFR2                 0.734   fibroblast growth factor receptor 2 isoform 8 precu...
FGFR2                 0.713   fibroblast growth factor receptor 2 isoform 2 precu...
FGFR2                 0.706   fibroblast growth factor receptor 2 isoform 5 precu...
FGFR2                 0.671   fibroblast growth factor receptor 2 isoform 9 precu...
FGFR2                 0.661   fibroblast growth factor receptor 2 isoform 3 precu...
FGFR3                 0.651   fibroblast growth factor receptor 3 isoform 1 precurs...
FGFR3                 0.610   fibroblast growth factor receptor 3 isoform 3 precu...
FGFR4                 0.571   fibroblast growth factor receptor 4 isoform 1 precur...
FGFR4                 0.571   fibroblast growth factor receptor 4 isoform 1 precur...
FGFR4                 0.552   fibroblast growth factor receptor 4 isoform 2 precur...
FGFR2                 0.517   fibroblast growth factor receptor 2 isoform 4 precu...
FGFR2                 0.463   fibroblast growth factor receptor 2 isoform 7 precu...
FGFR3                 0.412   fibroblast growth factor receptor 3 isoform 2 precur...
FGFR1                 0.302   fibroblast growth factor receptor 1 isoform 6 precur...
FGFR1                 0.299   fibroblast growth factor receptor 1 isoform 5 precur...
KDR                   0.209   kinase insert domain receptor precursor 
RET                   0.205   ret proto-oncogene isoform c 
RET                   0.205   ret proto-oncogene isoform a 
FLT1                  0.200   fms-related tyrosine kinase 1 isoform 1 precursor [...
KIT                   0.165   v-kit Hardy-Zuckerman 4 feline sarcoma viral oncoge...
KIT                   0.165   v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene...
TIE1                  0.152   tyrosine kinase with immunoglobulin-like and EGF-like...
TEK                   0.148   TEK tyrosine kinase, endothelial precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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