Guide to the Human Genome
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Name: FGFR1 Sequence: fasta or formatted (785aa) NCBI GI: 13186249
Description:

fibroblast growth factor receptor 1 isoform 9 precursor

Referenced in:

Fibroblast Growth Factors

Other entries for this name:
alt prot [822aa] fibroblast growth factor receptor 1 isoform 1 precursor
alt prot [733aa] fibroblast growth factor receptor 1 isoform 3 precursor
alt prot [731aa] fibroblast growth factor receptor 1 isoform 4 precursor
alt prot [302aa] fibroblast growth factor receptor 1 isoform 5 precursor
alt prot [300aa] fibroblast growth factor receptor 1 isoform 6 precursor
alt prot [820aa] fibroblast growth factor receptor 1 isoform 2 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         48           2
 C cysteine            2.2         17           1
 D aspartate           6.1         48           7
 E glutamate           6.8         53           2
 F phenylalanine       2.2         17           1
 G glycine             5.9         46           2
 H histidine           2.5         20           2
 I isoleucine          4.1         32           3
 K lysine              5.9         46           2
 L leucine             9.9         78           2
 M methionine          2.7         21           2
 N asparagine          3.7         29           1
 P proline             6.9         54           2
 Q glutamine           2.9         23           1
 R arginine            4.7         37           2
 S serine              9.2         72           3
 T threonine           5.1         40           2
 V valine              7.9         62           2
 W tryptophan          1.8         14           1
 Y tyrosine            3.6         28           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fibroblast growth factor receptor 1 isoform 9 precur... 
FGFR1                 0.989   fibroblast growth factor receptor 1 isoform 1 precu...
FGFR1                 0.983   fibroblast growth factor receptor 1 isoform 2 precur...
FGFR1                 0.834   fibroblast growth factor receptor 1 isoform 3 precur...
FGFR1                 0.828   fibroblast growth factor receptor 1 isoform 4 precur...
FGFR2                 0.686   fibroblast growth factor receptor 2 isoform 1 precu...
FGFR2                 0.656   fibroblast growth factor receptor 2 isoform 2 precu...
FGFR2                 0.626   fibroblast growth factor receptor 2 isoform 6 precu...
FGFR2                 0.620   fibroblast growth factor receptor 2 isoform 8 precu...
FGFR2                 0.608   fibroblast growth factor receptor 2 isoform 3 precu...
FGFR2                 0.590   fibroblast growth factor receptor 2 isoform 5 precu...
FGFR3                 0.566   fibroblast growth factor receptor 3 isoform 1 precurs...
FGFR2                 0.557   fibroblast growth factor receptor 2 isoform 9 precu...
FGFR3                 0.528   fibroblast growth factor receptor 3 isoform 3 precu...
FGFR4                 0.493   fibroblast growth factor receptor 4 isoform 1 precur...
FGFR4                 0.493   fibroblast growth factor receptor 4 isoform 1 precur...
FGFR4                 0.477   fibroblast growth factor receptor 4 isoform 2 precur...
FGFR2                 0.417   fibroblast growth factor receptor 2 isoform 4 precu...
FGFR2                 0.367   fibroblast growth factor receptor 2 isoform 7 precu...
FGFR3                 0.329   fibroblast growth factor receptor 3 isoform 2 precur...
FGFR1                 0.244   fibroblast growth factor receptor 1 isoform 5 precur...
FGFR1                 0.238   fibroblast growth factor receptor 1 isoform 6 precur...
KDR                   0.162   kinase insert domain receptor precursor 
FLT1                  0.160   fms-related tyrosine kinase 1 isoform 1 precursor [...
RET                   0.157   ret proto-oncogene isoform c 
RET                   0.157   ret proto-oncogene isoform a 
FLT4                  0.157   fms-related tyrosine kinase 4 isoform 1 precursor [...
FLT4                  0.157   fms-related tyrosine kinase 4 isoform 2 precursor [...
TIE1                  0.113   tyrosine kinase with immunoglobulin-like and EGF-like...
PTK7                  0.112   PTK7 protein tyrosine kinase 7 isoform a precursor [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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