CD74 34822

Name: CD74	Sequence: fasta or formatted (296aa)		NCBI GI: 68448544
Description: CD74 antigen isoform a		Referenced in: HLA and Related Proteins
Other entries for this name: alt prot [232aa] CD74 antigen isoform b alt prot [160aa] CD74 antigen isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.1 12 1 C cysteine 2.7 8 1 D aspartate 4.1 12 2 E glutamate 5.7 17 2 F phenylalanine 2.4 7 1 G glycine 6.4 19 1 H histidine 3.7 11 2 I isoleucine 1.7 5 1 K lysine 5.7 17 1 L leucine 11.8 35 3 M methionine 5.1 15 1 N asparagine 4.7 14 2 P proline 9.5 28 2 Q glutamine 5.7 17 3 R arginine 5.7 17 3 S serine 6.8 20 2 T threonine 5.4 16 2 V valine 4.7 14 1 W tryptophan 1.4 4 1 Y tyrosine 2.7 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CD74 antigen isoform a CD74 0.679 CD74 antigen isoform b CD74 0.457 CD74 antigen isoform c NID2 0.077 nidogen 2 precursor NID1 0.072 nidogen 1 precursor SPOCK1 0.060 sparc/osteonectin, cwcv and kazal-like domains proteo... SPOCK3 0.060 testican 3 isoform 1 SPOCK3 0.060 testican 3 isoform 2 SPOCK2 0.052 sparc/osteonectin, cwcv and kazal-like domains proteo... SMOC2 0.040 SPARC related modular calcium binding 2 TG 0.035 thyroglobulin SMOC1 0.035 secreted modular calcium-binding protein 1 isoform 1... SMOC1 0.035 secreted modular calcium-binding protein 1 isoform 2... IGFBP1 0.028 insulin-like growth factor binding protein 1 precurso... IGFBP2 0.023 insulin-like growth factor binding protein 2, 36kDa ... IGFBP4 0.022 insulin-like growth factor binding protein 4 precurs... IGFBP3 0.017 insulin-like growth factor binding protein 3 isoform... IGFBP3 0.017 insulin-like growth factor binding protein 3 isoform... EPCAM 0.015 epithelial cell adhesion molecule precursor IGFBP5 0.012 insulin-like growth factor binding protein 5 IGFBP6 0.012 insulin-like growth factor binding protein 6 TRIM33 0.012 tripartite motif-containing 33 protein isoform beta ... TRIM33 0.012 tripartite motif-containing 33 protein isoform alpha... PCDH12 0.010 protocadherin 12 precursor CPEB4 0.008 cytoplasmic polyadenylation element binding protein... PRR11 0.008 proline rich 11 UTRN 0.008 utrophin LOC100129463 0.007 PREDICTED: hypothetical protein LOC100129463 0.007 PREDICTED: hypothetical protein LOC100129463 0.007 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.