Guide to the Human Genome
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Name: BTN3A1 Sequence: fasta or formatted (352aa) NCBI GI: 37221189
Description:

butyrophilin, subfamily 3, member A1 isoform b

Referenced in:

Butyrophilin Family

Other entries for this name:
alt prot [461aa] butyrophilin, subfamily 3, member A1 isoform c
alt prot [378aa] butyrophilin, subfamily 3, member A1 isoform d
alt prot [513aa] butyrophilin, subfamily 3, member A1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         31           2
 C cysteine            1.4          5           1
 D aspartate           3.7         13           1
 E glutamate           6.8         24           2
 F phenylalanine       3.7         13           2
 G glycine             7.7         27           2
 H histidine           2.0          7           1
 I isoleucine          3.7         13           1
 K lysine              6.2         22           3
 L leucine            12.2         43           5
 M methionine          3.1         11           1
 N asparagine          2.0          7           2
 P proline             3.7         13           1
 Q glutamine           5.1         18           3
 R arginine            6.0         21           1
 S serine              8.2         29           3
 T threonine           3.7         13           1
 V valine              6.5         23           2
 W tryptophan          2.3          8           1
 Y tyrosine            3.1         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   butyrophilin, subfamily 3, member A1 isoform b [Homo... 
BTN3A1                0.966   butyrophilin, subfamily 3, member A1 isoform d [Hom...
BTN3A1                0.966   butyrophilin, subfamily 3, member A1 isoform a [Homo...
BTN3A3                0.806   butyrophilin, subfamily 3, member A3 isoform a 
BTN3A1                0.766   butyrophilin, subfamily 3, member A1 isoform c [Hom...
BTN3A2                0.757   butyrophilin, subfamily 3, member A2 precursor [Homo...
BTN3A3                0.716   butyrophilin, subfamily 3, member A3 isoform b [Homo...
BTN1A1                0.330   butyrophilin, subfamily 1, member A1 
BTN2A1                0.296   butyrophilin, subfamily 2, member A1 isoform 1 precur...
BTN2A1                0.296   butyrophilin, subfamily 2, member A1 isoform 2 precu...
BTN2A2                0.290   butyrophilin, subfamily 2, member A2 isoform a 
BTNL9                 0.283   butyrophilin-like 9 
BTNL2                 0.218   butyrophilin-like 2 
BTNL3                 0.216   butyrophilin-like 3 
BTNL8                 0.212   butyrophilin-like 8 isoform 2 precursor 
BTNL8                 0.205   butyrophilin-like 8 isoform 4 precursor 
BTNL8                 0.205   butyrophilin-like 8 isoform 1 precursor 
LOC100129094          0.172   PREDICTED: similar to hCG2036765 
LOC100129094          0.172   PREDICTED: similar to hCG2036765 
LOC100129094          0.172   PREDICTED: hypothetical protein LOC100129094 
MOG                   0.135   myelin oligodendrocyte glycoprotein isoform beta4 pr...
MOG                   0.135   myelin oligodendrocyte glycoprotein isoform alpha4 p...
MOG                   0.135   myelin oligodendrocyte glycoprotein isoform beta5 pr...
MOG                   0.135   myelin oligodendrocyte glycoprotein isoform beta2 pr...
MOG                   0.135   myelin oligodendrocyte glycoprotein isoform alpha3 p...
MOG                   0.135   myelin oligodendrocyte glycoprotein isoform beta3 pr...
MOG                   0.135   myelin oligodendrocyte glycoprotein isoform beta1 pr...
MOG                   0.135   myelin oligodendrocyte glycoprotein isoform alpha2 p...
MOG                   0.135   myelin oligodendrocyte glycoprotein isoform alpha1 p...
BTN2A2                0.118   butyrophilin, subfamily 2, member A2 isoform b [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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