Guide to the Human Genome
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Name: MPZL1 Sequence: fasta or formatted (209aa) NCBI GI: 46358426
Description:

myelin protein zero-like 1 isoform b

Referenced in:

Oligodendrocytes and Myelin

Other entries for this name:
alt prot [119aa] myelin protein zero-like 1 isoform c
alt prot [269aa] myelin protein zero-like 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         19           3
 C cysteine            1.0          2           1
 D aspartate           4.3          9           1
 E glutamate           2.9          6           1
 F phenylalanine       3.8          8           2
 G glycine             8.1         17           2
 H histidine           1.9          4           1
 I isoleucine          5.7         12           1
 K lysine              5.3         11           2
 L leucine             8.6         18           2
 M methionine          1.9          4           1
 N asparagine          3.8          8           1
 P proline             4.8         10           2
 Q glutamine           3.3          7           1
 R arginine            3.3          7           2
 S serine              8.1         17           1
 T threonine           6.7         14           2
 V valine             10.5         22           3
 W tryptophan          2.4          5           1
 Y tyrosine            4.3          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myelin protein zero-like 1 isoform b 
MPZL1                 0.965   myelin protein zero-like 1 isoform a 
MPZL1                 0.367   myelin protein zero-like 1 isoform c 
MPZ                   0.249   myelin protein zero 
MPZL2                 0.196   myelin protein zero-like 2 precursor 
MPZL2                 0.196   myelin protein zero-like 2 precursor 
MPZL3                 0.161   myelin protein zero-like 3 
SCN2B                 0.106   sodium channel, voltage-gated, type II, beta 
VSIG1                 0.095   V-set and immunoglobulin domain containing 1 
CXADR                 0.090   coxsackie virus and adenovirus receptor precursor [Ho...
AMICA1                0.073   adhesion molecule, interacts with CXADR antigen 1 i...
AMICA1                0.073   adhesion molecule, interacts with CXADR antigen 1 i...
IGSF11                0.070   immunoglobulin superfamily, member 11 isoform b [Hom...
IGSF11                0.065   immunoglobulin superfamily, member 11 isoform a [Hom...
SCN4B                 0.063   sodium channel, voltage-gated, type IV, beta isoform...
SCN1B                 0.055   sodium channel, voltage-gated, type I, beta isoform a...
SCN3B                 0.055   voltage-gated sodium channel beta-3 subunit precursor...
SCN3B                 0.055   voltage-gated sodium channel beta-3 subunit precurso...
SCN1B                 0.053   sodium channel, voltage-gated, type I, beta isoform ...
GPA33                 0.048   transmembrane glycoprotein A33 precursor 
PVRL1                 0.043   poliovirus receptor-related 1 isoform 3 
PVRL1                 0.043   poliovirus receptor-related 1 isoform 2 
PVRL1                 0.043   poliovirus receptor-related 1 isoform 1 
VSIG2                 0.040   V-set and immunoglobulin domain containing 2 
SCN4B                 0.030   sodium channel, voltage-gated, type IV, beta isofor...
VSIG8                 0.030   V-set and immunoglobulin domain containing 8 
CTLA4                 0.025   cytotoxic T-lymphocyte-associated protein 4 isoform ...
HLA-F                 0.025   major histocompatibility complex, class I, F isofor...
LOC100290006          0.025   PREDICTED: hypothetical protein XP_002347521 
CEACAM3               0.025   carcinoembryonic antigen-related cell adhesion mole...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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