Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: BTN3A1 Sequence: fasta or formatted (513aa) NCBI GI: 37595558
Description:

butyrophilin, subfamily 3, member A1 isoform a

Referenced in:

Butyrophilin Family

Other entries for this name:
alt prot [461aa] butyrophilin, subfamily 3, member A1 isoform c
alt prot [378aa] butyrophilin, subfamily 3, member A1 isoform d
alt prot [352aa] butyrophilin, subfamily 3, member A1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         38           2
 C cysteine            1.8          9           1
 D aspartate           4.7         24           1
 E glutamate           6.6         34           2
 F phenylalanine       3.9         20           2
 G glycine             7.2         37           2
 H histidine           2.1         11           1
 I isoleucine          4.1         21           1
 K lysine              6.2         32           3
 L leucine            10.9         56           5
 M methionine          2.1         11           1
 N asparagine          2.9         15           2
 P proline             5.1         26           2
 Q glutamine           4.1         21           3
 R arginine            5.7         29           1
 S serine              7.4         38           3
 T threonine           4.9         25           1
 V valine              7.0         36           2
 W tryptophan          2.5         13           1
 Y tyrosine            3.3         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   butyrophilin, subfamily 3, member A1 isoform a [Homo... 
BTN3A1                0.867   butyrophilin, subfamily 3, member A1 isoform c [Hom...
BTN3A3                0.850   butyrophilin, subfamily 3, member A3 isoform a 
BTN3A3                0.790   butyrophilin, subfamily 3, member A3 isoform b [Homo...
BTN3A1                0.643   butyrophilin, subfamily 3, member A1 isoform b [Homo...
BTN3A1                0.641   butyrophilin, subfamily 3, member A1 isoform d [Hom...
BTN3A2                0.503   butyrophilin, subfamily 3, member A2 precursor [Homo...
BTN1A1                0.396   butyrophilin, subfamily 1, member A1 
BTN2A2                0.353   butyrophilin, subfamily 2, member A2 isoform a 
BTN2A1                0.350   butyrophilin, subfamily 2, member A1 isoform 1 precur...
BTNL9                 0.335   butyrophilin-like 9 
BTNL3                 0.249   butyrophilin-like 3 
BTNL8                 0.238   butyrophilin-like 8 isoform 2 precursor 
BTN2A2                0.238   butyrophilin, subfamily 2, member A2 isoform b [Homo...
BTN2A1                0.197   butyrophilin, subfamily 2, member A1 isoform 2 precu...
ERMAP                 0.165   erythroblast membrane-associated protein precursor [...
ERMAP                 0.165   erythroblast membrane-associated protein precursor [...
TRIM39                0.149   tripartite motif-containing 39 isoform 2 
TRIM39                0.149   tripartite motif-containing 39 isoform 1 
TRIM11                0.147   tripartite motif-containing 11 
TRIM27                0.146   ret finger protein 
BTNL2                 0.145   butyrophilin-like 2 
TRIM58                0.142   tripartite motif-containing 58 
TRIM68                0.142   ring finger protein 137 
BTNL8                 0.140   butyrophilin-like 8 isoform 3 precursor 
BTNL8                 0.140   butyrophilin-like 8 isoform 5 
MEFV                  0.138   Mediterranean fever protein 
BTNL8                 0.136   butyrophilin-like 8 isoform 4 precursor 
BTNL8                 0.136   butyrophilin-like 8 isoform 1 precursor 
TRIM38                0.126   tripartite motif-containing 38 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press