Guide to the Human Genome
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Name: CUL3 Sequence: fasta or formatted (768aa) NCBI GI: 4503165
Description:

cullin 3

Referenced in:

Cullins and SCF Complexes
Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         35           2
 C cysteine            1.3         10           1
 D aspartate           4.8         37           3
 E glutamate           9.0         69           2
 F phenylalanine       4.3         33           2
 G glycine             5.2         40           2
 H histidine           2.5         19           2
 I isoleucine          5.2         40           2
 K lysine              7.8         60           2
 L leucine             9.5         73           2
 M methionine          4.2         32           1
 N asparagine          5.1         39           3
 P proline             2.5         19           2
 Q glutamine           4.9         38           2
 R arginine            7.0         54           2
 S serine              5.7         44           2
 T threonine           5.7         44           2
 V valine              7.2         55           2
 W tryptophan          0.4          3           1
 Y tyrosine            3.1         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cullin 3 
CUL4B                 0.319   cullin 4B isoform 2 
CUL4B                 0.319   cullin 4B isoform 1 
CUL4A                 0.317   cullin 4A isoform 1 
CUL4A                 0.302   cullin 4A isoform 2 
CUL1                  0.232   cullin 1 
CUL2                  0.194   cullin 2 
CUL5                  0.146   Vasopressin-activated calcium-mobilizing receptor-1 ...
C10orf46              0.017   chromosome 10 open reading frame 46 
ANAPC2                0.011   anaphase-promoting complex subunit 2 
CUL9                  0.009   p53-associated parkin-like cytoplasmic protein [Homo...
MAGI3                 0.008   membrane-associated guanylate kinase-related  3 iso...
LOC650621             0.007   PREDICTED: similar to anaphase-promoting complex su...
APP                   0.006   amyloid beta A4 protein isoform c precursor 
APP                   0.006   amyloid beta A4 protein isoform b precursor 
APP                   0.006   amyloid beta A4 protein isoform a precursor 
APP                   0.006   amyloid beta A4 protein isoform e precursor 
APP                   0.006   amyloid beta A4 protein isoform f precursor 
ERCC6L                0.006   excision repair protein ERCC6-like 
LOC643854             0.005   hypothetical protein LOC643854 
FNTA                  0.005   farnesyltransferase, CAAX box, alpha isoform c [Homo...
FNTA                  0.005   farnesyltransferase, CAAX box, alpha isoform b [Homo...
FNTA                  0.005   farnesyltransferase, CAAX box, alpha isoform a 
AKAP9                 0.005   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.005   A-kinase anchor protein 9 isoform 3 
CTAGE1                0.005   cutaneous T-cell lymphoma-associated antigen 1 isofo...
LAMB1                 0.005   laminin, beta 1 precursor 
SYCP1                 0.004   synaptonemal complex protein 1 
CTAGE5                0.004   CTAGE family, member 5 isoform 3 
CTAGE5                0.004   CTAGE family, member 5 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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