FNTA 34640

Name: FNTA	Sequence: fasta or formatted (312aa)		NCBI GI: 66882532
Description: farnesyltransferase, CAAX box, alpha isoform c		Referenced in: Prenylation and Related Modifications
Other entries for this name: alt prot [379aa] farnesyltransferase, CAAX box, alpha isoform a alt prot [288aa] farnesyltransferase, CAAX box, alpha isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 19 2 C cysteine 0.6 2 1 D aspartate 6.1 19 2 E glutamate 9.3 29 2 F phenylalanine 1.9 6 1 G glycine 3.5 11 2 H histidine 3.5 11 2 I isoleucine 4.8 15 2 K lysine 5.1 16 1 L leucine 10.6 33 2 M methionine 1.9 6 1 N asparagine 6.1 19 2 P proline 6.1 19 4 Q glutamine 8.3 26 3 R arginine 4.8 15 2 S serine 5.4 17 2 T threonine 2.6 8 2 V valine 5.8 18 1 W tryptophan 2.6 8 1 Y tyrosine 4.8 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 farnesyltransferase, CAAX box, alpha isoform c [Homo... FNTA 0.815 farnesyltransferase, CAAX box, alpha isoform a FNTA 0.781 farnesyltransferase, CAAX box, alpha isoform b [Homo... RABGGTA 0.076 Rab geranylgeranyltransferase alpha RABGGTA 0.076 Rab geranylgeranyltransferase alpha OGFRL1 0.029 opioid growth factor receptor-like 1 IRS2 0.024 insulin receptor substrate 2 PTAR1 0.024 protein prenyltransferase alpha subunit repeat cont... TOB1 0.023 transducer of ERBB2, 1 FUSSEL18 0.019 PREDICTED: functional smad suppressing element 18 [... FZD1 0.019 frizzled 1 FOXO1 0.019 forkhead box O1 FUSSEL18 0.019 PREDICTED: functional smad suppressing element 18 [... FUSSEL18 0.019 PREDICTED: functional smad suppressing element 18 [... MEX3A 0.018 MEX3A protein CCDC96 0.018 coiled-coil domain containing 96 MEF2A 0.016 myocyte enhancer factor 2A isoform 4 MEF2A 0.016 myocyte enhancer factor 2A isoform 3 MEF2A 0.016 myocyte enhancer factor 2A isoform 2 MEF2A 0.016 myocyte enhancer factor 2A isoform 1 LOC100133142 0.016 PREDICTED: similar to zinc finger protein 208 [Homo... LOC100292150 0.016 PREDICTED: hypothetical protein LOC100290302 0.016 PREDICTED: hypothetical protein XP_002346480 LOC100133142 0.016 PREDICTED: similar to zinc finger protein 208 [Homo... LOC100287337 0.016 PREDICTED: hypothetical protein XP_002342320 DBN1 0.016 drebrin 1 isoform b DBN1 0.016 drebrin 1 isoform a LOC65998 0.016 hypothetical protein LOC65998 VCL 0.016 vinculin isoform VCL VCL 0.016 vinculin isoform meta-VCL Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.