Guide to the Human Genome
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Name: ANAPC2 Sequence: fasta or formatted (822aa) NCBI GI: 7019327
Description:

anaphase-promoting complex subunit 2

Referenced in:

Anaphase-promoting Complex
Cullins and SCF Complexes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         56           3
 C cysteine            1.8         15           1
 D aspartate           6.1         50           2
 E glutamate           9.4         77           3
 F phenylalanine       3.3         27           2
 G glycine             5.1         42           2
 H histidine           1.5         12           1
 I isoleucine          3.6         30           2
 K lysine              3.5         29           2
 L leucine            13.3        109           5
 M methionine          2.3         19           1
 N asparagine          1.8         15           1
 P proline             4.7         39           2
 Q glutamine           5.0         41           2
 R arginine            8.5         70           3
 S serine              7.5         62           3
 T threonine           4.1         34           3
 V valine              7.1         58           3
 W tryptophan          1.7         14           1
 Y tyrosine            2.8         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   anaphase-promoting complex subunit 2 
LOC650621             0.455   PREDICTED: similar to anaphase-promoting complex su...
CUL4A                 0.025   cullin 4A isoform 1 
CUL4A                 0.025   cullin 4A isoform 2 
CUL4B                 0.024   cullin 4B isoform 2 
CUL4B                 0.024   cullin 4B isoform 1 
CUL1                  0.022   cullin 1 
CUL2                  0.016   cullin 2 
CUL3                  0.011   cullin 3 
CUL5                  0.010   Vasopressin-activated calcium-mobilizing receptor-1 ...
PCNT                  0.007   pericentrin 
C19orf69              0.006   hypothetical protein LOC100170765 
ITGA10                0.004   integrin, alpha 10 precursor 
TTN                   0.004   titin isoform novex-3 
PROM1                 0.004   prominin 1 isoform 2 
PROM1                 0.004   prominin 1 isoform 4 
PROM1                 0.004   prominin 1 isoform 5 
PROM1                 0.004   prominin 1 isoform 6 
PROM1                 0.004   prominin 1 isoform 7 
PROM1                 0.004   prominin 1 isoform 2 
PROM1                 0.004   prominin 1 isoform 1 
CROCC                 0.004   ciliary rootlet coiled-coil 
GNA15                 0.004   guanine nucleotide binding protein (G protein), alp...
LOC100292618          0.004   PREDICTED: hypothetical protein 
LOC100290170          0.004   PREDICTED: hypothetical protein XP_002347382 
LOC100289646          0.004   PREDICTED: hypothetical protein XP_002343220 
GAK                   0.004   cyclin G associated kinase 
ANKRD11               0.004   ankyrin repeat domain 11 
RNF19B                0.004   ring finger protein 19B isoform a 
ELTD1                 0.004   EGF, latrophilin and seven transmembrane domain con...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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