FNTA 34639

Name: FNTA	Sequence: fasta or formatted (288aa)		NCBI GI: 66882524
Description: farnesyltransferase, CAAX box, alpha isoform b		Referenced in: Prenylation and Related Modifications
Other entries for this name: alt prot [379aa] farnesyltransferase, CAAX box, alpha isoform a alt prot [312aa] farnesyltransferase, CAAX box, alpha isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.9 14 2 C cysteine 1.0 3 1 D aspartate 6.9 20 1 E glutamate 8.7 25 2 F phenylalanine 2.4 7 1 G glycine 1.4 4 1 H histidine 3.1 9 2 I isoleucine 5.6 16 2 K lysine 5.6 16 1 L leucine 11.8 34 2 M methionine 1.4 4 1 N asparagine 7.3 21 2 P proline 2.4 7 1 Q glutamine 6.9 20 2 R arginine 6.9 20 2 S serine 5.2 15 2 T threonine 3.5 10 2 V valine 6.2 18 1 W tryptophan 3.1 9 1 Y tyrosine 5.6 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 farnesyltransferase, CAAX box, alpha isoform b [Homo... FNTA 0.982 farnesyltransferase, CAAX box, alpha isoform a FNTA 0.853 farnesyltransferase, CAAX box, alpha isoform c [Homo... RABGGTA 0.096 Rab geranylgeranyltransferase alpha RABGGTA 0.096 Rab geranylgeranyltransferase alpha PTAR1 0.037 protein prenyltransferase alpha subunit repeat cont... CUL3 0.014 cullin 3 CDC27 0.014 cell division cycle protein 27 isoform 1 CDC27 0.014 cell division cycle protein 27 isoform 2 CRNKL1 0.012 crooked neck-like 1 protein GOLGB1 0.012 golgi autoantigen, golgin subfamily b, macrogolgin ... TTC7B 0.012 tetratricopeptide repeat domain 7B KTN1 0.012 kinectin 1 isoform b KTN1 0.012 kinectin 1 isoform a KTN1 0.012 kinectin 1 isoform a CHD8 0.011 chromodomain helicase DNA binding protein 8 TRIP11 0.011 thyroid hormone receptor interactor 11 DNHD1 0.009 dynein heavy chain domain 1 isoform 1 KTN1 0.009 kinectin 1 isoform c TUBGCP2 0.007 tubulin, gamma complex associated protein 2 INHBB 0.007 inhibin beta B subunit preproprotein CENPF 0.007 centromere protein F MRPL44 0.007 mitochondrial ribosomal protein L44 LRP6 0.005 low density lipoprotein receptor-related protein 6 ... LMNB2 0.005 lamin B2 FILIP1 0.005 filamin A interacting protein 1 NARG1L 0.005 NMDA receptor regulated 1-like protein isoform 1 [Ho... NARG1L 0.005 NMDA receptor regulated 1-like protein isoform 3 [H... NARG1L 0.005 NMDA receptor regulated 1-like protein isoform 2 [Ho... APOL2 0.005 apolipoprotein L2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.