Guide to the Human Genome
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Name: C10orf46 Sequence: fasta or formatted (369aa) NCBI GI: 109452597
Description:

chromosome 10 open reading frame 46

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         32           4
 C cysteine            1.4          5           1
 D aspartate           4.6         17           2
 E glutamate           7.3         27           4
 F phenylalanine       3.0         11           1
 G glycine             4.9         18           2
 H histidine           1.4          5           1
 I isoleucine          6.2         23           1
 K lysine              5.4         20           2
 L leucine             8.4         31           3
 M methionine          3.8         14           2
 N asparagine          4.1         15           2
 P proline             9.2         34           6
 Q glutamine           5.7         21           2
 R arginine            3.5         13           1
 S serine              8.4         31           3
 T threonine           4.3         16           1
 V valine              4.3         16           1
 W tryptophan          0.8          3           1
 Y tyrosine            4.6         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   chromosome 10 open reading frame 46 
CUL3                  0.036   cullin 3 
CRTC1                 0.028   mucoepidermoid carcinoma translocated 1 isoform 3 [...
CRTC1                 0.028   mucoepidermoid carcinoma translocated 1 isoform 1 [...
RFX1                  0.024   regulatory factor X1 
CASKIN1               0.021   CASK interacting protein 1 
FOXG1                 0.021   forkhead box G1 
ADAMTS19              0.021   ADAM metallopeptidase with thrombospondin type 1 mo...
HMX3                  0.019   H6 family homeobox 3 
C11orf63              0.019   hypothetical protein LOC79864 isoform 2 
WIPF2                 0.019   WIRE protein 
C11orf63              0.019   hypothetical protein LOC79864 isoform 1 
WASF1                 0.019   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.019   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.019   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.019   Wiskott-Aldrich syndrome protein family member 1 [Hom...
NFATC1                0.019   nuclear factor of activated T-cells, cytosolic compo...
NFATC1                0.019   nuclear factor of activated T-cells, cytosolic compo...
APBB1IP               0.019   amyloid beta (A4) precursor protein-binding, family ...
WAS                   0.019   Wiskott-Aldrich syndrome protein 
PWWP2A                0.019   PWWP domain containing 2A isoform b 
PWWP2A                0.019   PWWP domain containing 2A isoform a 
MLXIPL                0.018   Williams Beuren syndrome chromosome region 14 isofor...
MLXIPL                0.018   Williams Beuren syndrome chromosome region 14 isofor...
MLXIPL                0.018   Williams Beuren syndrome chromosome region 14 isofor...
MLXIPL                0.018   Williams Beuren syndrome chromosome region 14 isofor...
ZFHX4                 0.018   zinc finger homeodomain 4 
ATOH8                 0.018   atonal homolog 8 
WASL                  0.018   Wiskott-Aldrich syndrome gene-like protein 
GAB2                  0.018   GRB2-associated binding protein 2 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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