Guide to the Human Genome
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Name: CUL4A Sequence: fasta or formatted (759aa) NCBI GI: 57165424
Description:

cullin 4A isoform 1

Referenced in:

Cullins and SCF Complexes

Other entries for this name:
alt prot [659aa] cullin 4A isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         42           3
 C cysteine            1.2          9           1
 D aspartate           6.2         47           1
 E glutamate           8.0         61           3
 F phenylalanine       4.9         37           1
 G glycine             5.0         38           2
 H histidine           2.9         22           1
 I isoleucine          5.4         41           2
 K lysine              9.1         69           2
 L leucine            11.6         88           3
 M methionine          3.4         26           1
 N asparagine          3.3         25           1
 P proline             3.0         23           1
 Q glutamine           5.4         41           2
 R arginine            5.7         43           2
 S serine              5.7         43           2
 T threonine           4.5         34           2
 V valine              5.8         44           1
 W tryptophan          0.8          6           1
 Y tyrosine            2.6         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cullin 4A isoform 1 
CUL4A                 0.867   cullin 4A isoform 2 
CUL4B                 0.821   cullin 4B isoform 2 
CUL4B                 0.821   cullin 4B isoform 1 
CUL3                  0.320   cullin 3 
CUL1                  0.204   cullin 1 
CUL2                  0.176   cullin 2 
CUL5                  0.137   Vasopressin-activated calcium-mobilizing receptor-1 ...
ANAPC2                0.027   anaphase-promoting complex subunit 2 
CUL9                  0.011   p53-associated parkin-like cytoplasmic protein [Homo...
LOC650621             0.010   PREDICTED: similar to anaphase-promoting complex su...
CEP135                0.010   centrosome protein 4 
LAMA2                 0.009   laminin alpha 2 subunit isoform b precursor 
LAMA2                 0.009   laminin alpha 2 subunit isoform a precursor 
MYH11                 0.006   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.006   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.006   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.006   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
CLIP1                 0.005   restin isoform a 
DNAH8                 0.005   dynein, axonemal, heavy polypeptide 8 
SPTBN5                0.005   spectrin, beta, non-erythrocytic 5 
LOC100293947          0.005   PREDICTED: hypothetical protein 
LOC100289915          0.005   PREDICTED: hypothetical protein XP_002348252 
LOC100288882          0.005   PREDICTED: hypothetical protein XP_002342240 
SACS                  0.005   sacsin 
TLR3                  0.004   toll-like receptor 3 
EFCAB4B               0.004   EF-hand calcium binding domain 4B isoform a 
KRT6C                 0.004   keratin 6C 
DNAH5                 0.004   dynein, axonemal, heavy chain 5 
KRT6B                 0.004   keratin 6B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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