CLTA 28456

Name: CLTA	Sequence: fasta or formatted (218aa)		NCBI GI: 4502899
Description: clathrin, light polypeptide A isoform a		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [236aa] clathrin, light polypeptide A isoform c alt prot [248aa] clathrin, light polypeptide A isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.8 30 3 C cysteine 0.5 1 1 D aspartate 6.4 14 1 E glutamate 12.8 28 2 F phenylalanine 2.3 5 1 G glycine 8.7 19 2 H histidine 0.9 2 1 I isoleucine 3.7 8 1 K lysine 5.0 11 1 L leucine 6.0 13 1 M methionine 1.8 4 1 N asparagine 4.1 9 2 P proline 7.3 16 2 Q glutamine 6.0 13 2 R arginine 5.0 11 1 S serine 6.4 14 2 T threonine 1.4 3 1 V valine 4.1 9 1 W tryptophan 1.8 4 1 Y tyrosine 1.8 4 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 clathrin, light polypeptide A isoform a CLTA 0.974 clathrin, light polypeptide A isoform c CLTA 0.962 clathrin, light polypeptide A isoform b CLTB 0.540 clathrin, light polypeptide isoform a CLTB 0.513 clathrin, light polypeptide isoform b RDX 0.036 radixin RNF40 0.036 ring finger protein 40 LOC727832 0.034 golgi autoantigen, golgin subfamily a-like LOC440243 0.034 PREDICTED: Putative golgin subfamily A member 6-lik... LOC728636 0.031 PREDICTED: similar to golgi autoantigen, golgin sub... MSN 0.031 moesin LOC440295 0.031 hypothetical protein LOC440295 ZRSR2 0.031 U2 small nuclear RNA auxiliary factor 1-like 2 RNF169 0.031 ring finger protein 169 PRR12 0.031 proline rich 12 LOC400352 0.029 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.029 PREDICTED: similar to Putative golgin subfamily A m... LOC283685 0.029 PREDICTED: golgi autoantigen, golgin subfamily a-li... LOC647042 0.029 PREDICTED: hypothetical protein isoform 2 EIF5B 0.026 eukaryotic translation initiation factor 5B WDR87 0.026 NYD-SP11 protein LOC283767 0.026 golgi autoantigen, golgin subfamily a-like LOC645202 0.026 PREDICTED: hypothetical protein LOC645202 LOC100133220 0.024 PREDICTED: hypothetical protein COL4A6 0.024 type IV alpha 6 collagen isoform A precursor TCF3 0.024 transcription factor 3 isoform E47 RNF168 0.024 ring finger protein 168 GBP6 0.024 guanylate binding protein family, member 6 COL4A6 0.024 type IV alpha 6 collagen isoform B precursor PLEC1 0.024 plectin 1 isoform 11 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.